Home
Mutant Lines
16-1973-1

16-1973-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 8407042 [Map]; Strand: w
- AT1G23770.1 - [+] show detail - F-box family protein
  Distance: -776; Region: promoter
- AT1G23780.1 - [+] show detail - F-box family protein
  Distance: 0; Region: exon1 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
CCGAGTGAGA AAATGGAACT GGTGAATCTT TCTGAAGGCA GGAGAAGTAG 
TATATGACTT TTCCGATATC AGCAAATAAA TTGGGAGGAT ACTAATATAG 
TAATATGTTT GATCTTTAAA TGTTCATTTG GTTTTGAATA ATTTATCTTC 
TTCTTGCCAT GATGTGTTAT ATGGTTGCTC TCTTATTGAG TGTTTTTTCT 
TTCTGTAAAG CT

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 8407120 [Map]; Strand: w
  - AT1G23770.1 - [+] show detail - F-box family protein
    Distance: -854; Region: promoter
  - AT1G23780.1 - [+] show detail - F-box family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 16-1973-1 - 5-prime edge
```
TTTGCTAGTT GCGTCCCCCA AGATTGCATC TTGGAGTAAA GAGCTGTCCC 
CATGTTCGTC TGCCGAGCCC ACAGTGCCGA TTGCCCCGGG TGAATACCAA 
TGGATC
```

AT1G23770.1

Model type: Protein coding
Short Description: F-box family protein
Computational Description: F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G23780.1); Has 268 Blast hits to 268 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23780.1

Model type: Protein coding
Short Description: F-box family protein
Computational Description: F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G23770.1); Has 310 Blast hits to 310 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR