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Mutant Lines
16-1613-1

16-1613-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 3; Position: 22524295 [Map]; Strand: w
- AT3G60940.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
  Distance: -595; Region: promoter
- AT3G60950.1 - [+] show detail - C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase
  Distance: -180; Region: promoter
Chromosome: 3; Position: 22585475 [Map]; Strand: w
- AT3G61028.2 - [+] show detail - Putative endonuclease or glycosyl hydrolase
  Distance: -537; Region: promoter
- AT3G61028.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
  Distance: -595; Region: promoter
- AT3G61030.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
  Distance: -180; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCC TAATCATATG ATATTCCACA TAACTGAACA 
TTAAAAACAA AGAATAATTC TGGTGCTGGA GTAATAATAT AAGAAAAATC 
TAATAAGGGG CATAAGTGAT AATAATTCAT TTATCTCTCC CTCGCGATTT 
TGGTCTAGGG TTTCTTCAAG TTCCTGATCG GATTCGGTCG GCGTAGCTCT 
AATGGCTGGC TGGAGTCGTA TGATGACTTA CCGATCCATC AAGCGAGTCT 
CCAAGGTTCA GTTGAATCAA TCTGCTTATT CTCAAAGTGA TTGGGATCTG 
GATTCTGAAA TTGATTCATC GGAGAAATTG TAAGATTCTA AATCTGGGAT 
TTTAAAATTC GTCGTGATTG TGTATGTTGG TCTTGGGATT AGGTGAAACT 
CGTAATTTAA CAGTGCCTGT TTTGTGTGTA CTTATAATAG ATTCGGCTTA 
GCAATTCCCT CTGCAACTTC TAATTATTGA CATTAATGTA ACAAGTTAGT 
GTCATCTGGT GGTGATTCTA CTTAGCGAGC TGGTGGTGGC TCACTATTTT 
TCTATTTAAC AACCATGCTT CTGTGTGAGA ACTGACAAGT GACATGCGGC 
TTGCATTACT TGCTAAGTTT GACAGAGTAG AGGAGTTTCT TGTCCTTCAA 
ATACTCTACA ATTGACTAGT TATACTCTTG TCTTCTGACA GGCAGTTGAT 
ATGAAAGTTC TAGGCTCTCT TANCAGANAC NATTTTTGAA

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 22524296 [Map]; Strand: w
  - AT3G60940.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
    Distance: -596; Region: promoter
  - AT3G60950.1 - [+] show detail - C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase
    Distance: -179; Region: promoter
2. Chromosome: 3; Position: 22585476 [Map]; Strand: w
  - AT3G61028.2 - [+] show detail - Putative endonuclease or glycosyl hydrolase
    Distance: -538; Region: promoter
  - AT3G61028.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
    Distance: -596; Region: promoter
  - AT3G61030.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
    Distance: -179; Region: promoter
Flanking Genome Sequence: 16-1613-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTGATCGTTG ATTAATTAAT TTCTTATTTT TCGTATTCAA AATGTCTAGT 
TATAAACGTG ACAAAACTAC GTATTTTATC ACACGAGTGA TCATCTAAGA 
GTAAATTTAT TGATTACATT TAAATACAAA ATCTAAGCAA TGATATATTA 
GTTTGACGTA GTTAACCACA TGTTACATCG CCATATACTA ACCTTCTTTA 
GAGTTAATTG GCGAATAGAC AATAACGTGA CCAATGCCGT AATTAAGTGC 
AAATCGATGT CATTAATTAA GTGCAACAGA AATATTTATA TGGTCGATCA 
GCTAATGGAA GTTTCTAGTT ATCTACGATG ATATTAAGTG CAACATAAAT 
ATTTATATGG TAAATAGCAT TAATCTTTTG GCTAATTTAT CTACACTAAT 
ATTATTAATC CAATGCCGTA AATACAATGA AGATAAGTTA TGATTTATAA 
AAAATAAAAA TATAAAAATT GGGAGAAATA TAGATTTGGT GGGCCCTTTG 
AAACGGAAAA GGGTAAATCC GTAATAAGCA CCTCGA
```

AT3G60940.1

Model type: Protein coding
Short Description: Putative endonuclease or glycosyl hydrolase
Computational Description: Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G61028.1); Has 311 Blast hits to 295 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 26; Plants - 276; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G60950.1

Model type: Protein coding
Short Description: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase
Computational Description: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 4425 Blast hits to 4326 proteins in 1442 species: Archae - 111; Bacteria - 2322; Metazoa - 578; Fungi - 318; Plants - 452; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G61028.1

Model type: Protein coding
Short Description: Putative endonuclease or glycosyl hydrolase
Computational Description: Putative endonuclease or glycosyl hydrolase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G60940.1); Has 309 Blast hits to 295 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 24; Plants - 280; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G61028.2

Model type: Protein coding
Short Description: Putative endonuclease or glycosyl hydrolase
Computational Description: Putative endonuclease or glycosyl hydrolase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G60940.1).
Link: InterPro Scan - TAIR

AT3G61030.1

Model type: Protein coding
Short Description: Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description: Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 4067 Blast hits to 3968 proteins in 1320 species: Archae - 109; Bacteria - 2078; Metazoa - 577; Fungi - 310; Plants - 450; Viruses - 0; Other Eukaryotes - 543 (source: NCBI BLink).
Link: InterPro Scan - TAIR