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16-1575-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 126806 [Map]; Strand: c
      • AT4G00300.1 - [+] show detail - fringe-related protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1575-1 - 5-prime edge 
    GNAAANACGG GGCGCNNGAG GAACAGCCNC CCTCTGANGN NGGGGATAAN 
    GANCCNNNGN GGNCNANCAC NCGCGCNNNA ANGCGAGAAT ANAAACCGAN 
    GACCNGNGNA CACCNAAGAC NGAGNGNGAG ANCTNCGNCT GGNCCNCANG 
    NGNNNGACCN GACCCGAGAC GGATAACGGG TACGAGGAGA GAATTGGGGG 
    ATTTAGAAGG TGAATATGGG TTTAGAAAAG AGATGAAACT GAATGAGTAT 
    AAGAGATATG AGACGAAGAT CAAGAAGACG ACGATGGCCG TGAAGGAACA 
    TGGAGATGAA GAAGAAGAAT AAAAGGGTTT ATTAGATTTG TCGTAAGAAA 
    GNGTTTNTNG ATCTTTGTGA TTGTTTTCTG CCATGGCTCT GATTGACATA 
    GATGACGAAA TTTTAGGGTT TTTNTCTGAG GAGAAGAGAC TAGNNTTTTT 
    TGGTNNNGNT TTGTGAGTTG AGACAGTGGN GGGGTNGGGG AAATTGANGG 
    CTNNNNNTNA GGAAATGAAC CAAGNTTTTT TTTNANANNN ANAANNAAAN 
    ANGNTANTNN NNNACNCNAA AANNGNNGGG NGNGNNNAAG ANNTCGANNG 
    GGNNAAAAAN NANNNAAAAG AGGNNGACNG GGNGGGGNAA ANNANTNAAA 
    AAATNNNANC TAAAANNAAA ANAAAAATTT NNNNANANGG TNAAAAATNA 
    TAGTNANGAA AAAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 126882 [Map]; Strand: c
      • AT4G00300.1 - [+] show detail - fringe-related protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1575-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CGTTTCTTCT TCATCAGCTT TGCCTCAGAT CAGAATCTCT TCCGACACGT 
    CGAGTTTCAA GTACCGTTAC CGTAACGGTC ACAGATCAGC GATCAGGATC 
    ACGAGAATCG TGTCCGAGAC GGTGAGGATG TTAAACGGAA CGGAAGCCGG 
    AGAGAAACGT GAGGTGGGTT GTGATGGGTG ACGACGATAC CGTGTTTTTC 
    ACNGGAAAAT CTTGTTAGGG NTTTGAGAAA GTNCGATCAT AAACAGTTTT 
    ATTACNTCGG AGCTCCGTCC GAAAGTCATT TGCNNAATCT TCATCAGTTT 
    TTTTTTGGAA TGGCNTNCGG GGGAGGAGGG TTGCTTTANT TTTCCTTTNC 
    CCAGGTTTGG GAAAAATCCC AAAAGGGGTT TTNANAAAAC NCCNNTTTGN 
    GGGTNAAANC CNGGGGNNNA ACNCNNGNCC TTT

AT4G00300.1

Model type
Protein coding
Short Description
fringe-related protein
Computational Description
fringe-related protein; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G01570.1); Has 958 Blast hits to 946 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 87; Fungi - 151; Plants - 707; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR