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Mutant Lines
16-1069-1

16-1069-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 19601676 [Map]; Strand: c
- AT3G52880.1 - [+] show detail - monodehydroascorbate reductase 1
  Distance: 0; Region: exon10 (CDS)
- AT3G52880.2 - [+] show detail - monodehydroascorbate reductase 1
  Distance: 0; Region: exon11 (CDS)

TGAAANCGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCTCC 
AAATCTTGGT TTTGGGTTTG ATGGATTGCT GTCTCCAAAT AACACAGAGT 
CTCCTACGTT GTCTCCGTAG AACTGCCATG AGAGATCAAA GGAGCGAGAG 
TAGAAGAATG GAAGATAGTC GTATTCCTCC ACCGCTGCGC CTCCCTCAGC 
CGCTTTGATC GCCTGCCACA ATGTATCACA TATATAAACG CTTCATCAGA 
TATATACAAC NTGTATGTTA ATCTATAAGA TTTAGGCCTC AAGAGTTTGC 
GTTGCATTTT TTATGGTATG GATTAATAGG GTTTTACCTT AACAGCTTGC 
TCTGCTGATT TGCGGGAATG GTCAACATGC TCGACCCTTC TCACGTCTCC 
GTACATTTTC AAAGGGAAAG TAGTAACGTC ACCAACAGCG TAAACATCTG 
GAACACTTGT TTTGAAGAAT GCATCGGTCT GTGTGAAACA GTTAAGCAGT 
CAATTTAAAA GATCCAAATC AGAATGGTAC GGGATAAGAA GAAGAAGAGA 
CGCACAGGCA GCAGATAAAT ACCTTAATTC CACCTTTATC TTCCTCGACC 
TGTCCCTTGA ATAAGGATGT CAATGGTTTT GCACCAACCC CAACTATCAC 
AATGTCGGCT TCCAATGTCC TCCCATCCTT GAGTTGTACT TCCTTCACCT 
GGAGGATTAT ATAATACAAG TAAGACATTT GCAACGAGAC CATTTGGAAA 
AGCTAATTAA TCGAGTTCGT CAAACGAAAC CCGAACCTAA CATAACATTG 
TAATTTG

5 prime edge [+] show sequence

Chromosome: 3; Position: 19601636 [Map]; Strand: c
- AT3G52880.1 - [+] show detail - monodehydroascorbate reductase 1
  Distance: 0; Region: exon10 (CDS)
- AT3G52880.2 - [+] show detail - monodehydroascorbate reductase 1
  Distance: 0; Region: exon11 (CDS)

CGTNATAAAC TAACAAAATC GGTTATACAG ATAACGGTCG GTACGGGATT 
TTCCCATCCT ACTTTCATCC CCTGATATTG GGTTCAAGGT GGTAAANTGG 
CTGGAGCATT CATGGAGGGA GGTAGTGGNG ATGAGAACAA AGCCTTGGCT 
AAAGTCGCCA AAGCTCGACC TTCTGCAGAG AGTCTCGACG AGCTCGTGAA 
ACAAGGAATT TCCTTCGCAG CTAAGATCTG AGTGAAACAC AACCACCAAA 
ACAAACTCAC GTTTTCTCTT CTATGTTAAA ATAAAAACTT GTTTAGCTAT 
AATAAGTTGT GTGTTTGTAT TGTCTCTCTA AACTCCATGA GAAGAGTCTA 
CGGCAGAGGA AACCCTGAAC CACATTCACA TTTTAGATCA TGTGTTGGTT 
TTCTGTGTTT CAGTATCTGT CTTGGTTTCT TAATGTGAAC AACTCCAAAA 
CCACATTTAC TGTAATCTCA AATGAAGGGA GTAATTTACA ATATGAAAGC 
AAATGGGCCT TGAAATAGTA ATTCGTAGAC TCTAATGGGC ATTGGACGAC 
CCTTGAAATG TCAATTCGAT CTTTAATTGG ACATCTCTCA TTGTTCCATG 
TCCTCGGCTC GACTAGGTTT TTCTTAGAAT TAGTTTTGAT ATATACACAA 
ACCGAAGAAA ACTTGAAAAT TTTGAGTTAN AAATTCATAA ATTTAACATG 
ATATTAGTCC CTTTTGCTAG TGAAAATCAA ATTTATTTCC AGTCGTANAG 
TGGAATT

AT3G52880.1

Model type: Protein coding
Short Description: monodehydroascorbate reductase 1
Curator Summary: Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2
Computational Description: monodehydroascorbate reductase 1 (MDAR1); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: response to cadmium ion, peptidyl-cysteine S-nitrosylation, hydrogen peroxide catabolic process; LOCATED IN: peroxisomal matrix, apoplast, chloroplast, peroxisome, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 31553 Blast hits to 31492 proteins in 3048 species: Archae - 709; Bacteria - 24685; Metazoa - 865; Fungi - 647; Plants - 730; Viruses - 0; Other Eukaryotes - 3917 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G52880.2

Model type: Protein coding
Short Description: monodehydroascorbate reductase 1
Curator Summary: Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2
Computational Description: monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink).
Link: InterPro Scan - TAIR