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16-0904-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22763855 [Map]; Strand: w
      • AT3G61510.1 - [+] show detail - ACC synthase 1
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 16-0904-1 - 5-prime edge
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TAAGCATATG CCTCAAATCC ATCAAAACGA
    ATAAACCCGC GTTGCTTCTC AAGCAAGAAA TCCCCATCTC TTCAAGCCCT
    TCCGTGAACA TATGGTGTCT CTTCGCTACT CTTTTCGAAA CCTCAACAAG
    AAAGTTATCG ACAAAACTCT GATCAGACAA CATAGCAGCT AGAAAACTTT
    GTGTCTGCGA CGAGACCAAT CCAAAACTCG ACATCCTCCT TGCGCAGGAC
    ACAACAACAT CGTTGTAAGA GTAAACCACT CCAACCCGGA AACCGGGAAG
    ACCCATGTCC TTTGAAAGAC TGTAGACGAT ATGAATCAGA TCACAGTTAA
    CATAATACAT CCCTTGGATG ATCTCTGCAA CACTGATGAA TCCCGGTTCC
    GCAAAAACCG TTGCTGCGTA TATTTCGTCG CATACTAAGT GAATTTGCTT
    GTCGTTGATG AAGCTGACAA GGCTTTCAAG AGTTTCTCGA TC

AT3G61510.1

Model type
Protein coding
Short Description
ACC synthase 1
Curator Summary
Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity.
Computational Description
ACC synthase 1 (ACS1); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 2 (TAIR:AT1G01480.1); Has 22999 Blast hits to 22998 proteins in 2818 species: Archae - 808; Bacteria - 15898; Metazoa - 560; Fungi - 631; Plants - 1241; Viruses - 0; Other Eukaryotes - 3861 (source: NCBI BLink).
Link
InterPro Scan - TAIR