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16-0501-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 474792 [Map]; Strand: w
      • AT4G01090.1 - [+] show detail - Protein of unknown function (DUF3133)
        Distance: -1000; Region: promoter
    Flanking Genome Sequence: 16-0501-1 - 5-prime edge 
    CAGATATCGC AATTTTCCAA AATTGTGAAC TTGATTACTA AGAACAATTC 
    AATTACTTGG AAAAAACATC CAAATTTAGA ACTTACGATT ATTATTTATT 
    TTTAAATACA TGCCAATAGG AACCATGCAT TAATATTTAA TCTATGCAAT 
    ATTTTATTTT TCGGAATATT AGGAGGTTCT AAGTCAAAAC CGTAATCTTC 
    TAAGTCCAAA ACTACATCAT ATAGTATTAG TTTCGTCTTA AATGTCATTC 
    AAACCGGCGA CCTTTAAACT TCGCTTACGA TCGTCATCAG TTGAGTTAAT 
    GACACTTGGA ATTTGTCCGA TACTTGTTTT CTAAAACTAA GACGACTTCC 
    TTATATTTTC CTATTTATGT GAGTGTGTTG GTACGGAAAC AGACCAGCTA 
    GTCAAATGAA ATTATACATT CAGCAACTTT TTTAATATCA ATAATACAAA 
    TAAAAAGTAA ATAAAAATAC GTCAAGTTTA ATGCTTCCAT GTTAGAAGAC 
    GTGCTCTCAA AACTTCTTCT TTAATTTGTT TTATAATTCA CAACTTGAAT 
    CCAAAATAAA CCTGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 473941 [Map]; Strand: w
      • AT4G01090.1 - [+] show detail - Protein of unknown function (DUF3133)
        Distance: -149; Region: promoter
    Flanking Genome Sequence: 16-0501-1 - 3-prime edge 
    GATATCTGAG AACGTATTAA TTTACCTGTC GGTAAACAGT CACACTCATG 
    TTTCTAGATT TCGTATATTT TAGATAATTT GGTTAGTCTC CTTATCTACG 
    AGTCAACGAG ACCCGGTCCG CTCAACCGTA CTACAGTCTA AATTCTACTT 
    TTCACGCGCT TACTTACATT ACATACGCGC TCATCTCTTC TTTACTCGAA 
    AGTTTTAAAA AACGAATATC AAATCAACGC TAACAAAGTT TGATTTTTTG 
    CTTCCATCTT CTTCCCCTCC TTAAGTTTTC AAATCTATTC ATCAAATTTT 
    CTTTTGTCTT TCCCTTAAGA TTCCCGGGAA AGCCAAGGAA AAACGCTAGA 
    AGAAAATTAA CATAATAATG TTAATTGTTG CTAAAACCTT CCAGCTCAAG 
    TTTGGTAGTA AGTAAGCAGA CATTTAATCC CCCAAGAAGC GATTGAAGAA 
    GACTTTTAAT TCTTCTGAAT TTTCTTTCCA AAAACCCCTT TTTAGAAAAT 
    TGGTTGCATC ATAGAGATTG GTTCATTTAT TCCCACCGGA GAAGATCATC 
    AAATTCGTCT TCTCACCTAT ATCGCCGACG ACATTCTTCA CGGGTCGTTT 
    GATTTCTACC TGNNGGGTCT TCGTTTTATT CTGAATT

AT4G01090.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3133)
Computational Description
Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT1G01440.1); Has 1545 Blast hits to 1451 proteins in 231 species: Archae - 0; Bacteria - 62; Metazoa - 476; Fungi - 316; Plants - 452; Viruses - 2; Other Eukaryotes - 237 (source: NCBI BLink).
Link
InterPro Scan - TAIR