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16-0332-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100720 [Map]; Strand: w
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0332-1 - 5-prime edge 
    GCAAGAACAA CAACAAGAAC CAAAGAAACA AAAACAATCT CTAAAACCAT 
    ATCAATGGGA CTACAAGGTC AGCTCTCCGA CGTGTCATCA GATTCGATCC 
    CACTGATGCT ACTGGCTCTC CTCGCAACTT TCTTCAGACA CNGTCCGGTC 
    TCTTCTCCTC TTCCCTTCTT CTGCCCCCGT TGTTGTTGTT ACTTCAAACC 
    TCAGCGTCCT CGCCGACCAG CTCAACCTAA ATCGCCTCTT CTCGTACCGC 
    TACTCCGACA ACGCAGCCTC TGACTGCATC GTGTGTCTGT CTAAACTCAA 
    GACCGGAGAA GAAGTGAGGA AGCTAGATTG CAGACACGTC TTCCATAAGC 
    AGTGTTTGGA AGGCTGGCTT CAACATCTCA ACTTCAATTG CCCGCTCTGT 
    AGATCTCCAT TGCTACCTCA TCATCATCAG GGACATGGCA GTGATGCGTC 
    GATCTCAGCC TTCCCTCTTC GCTCTACCTC TACTGCATCA TCTCATTGAT 
    TTTTATGTGA AGAAAGAAGA AAGCANGAGA GAAGAAGATG GAGGGAGGAT 
    GCTTTNTTAT TTATCTTCCT TCTCCTCTTT CCTTTTTAGG AGAAGATTCT 
    TATTTCTTAC TACAGAAGAT NGATNCTTCT TATATATCTA TATATATATA 
    ACCTTNTATA TTNANCTATG TTTTTGAGGA ATCTCANATC GGAANAAANG 
    GCCNTTTGGT TTTNAAANTN CACTNTGNNA ATTNTNANNN NAAAANA

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR