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16-0174-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24047682 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 16-0174-1 - 3-prime edge 
    GAAACAACAC TGTTTAGCAC TGGAACAAGT TAAACTAAGA ATGGATAAAT 
    ATCATTTTCC GTCCTTTTGG ACCATTGTAA TCTTATAAGA TTTCTCTGTT 
    TCACTTATCG TTTTCTTGTC CTACACTTCT GCTTAGTGTC CAGAAACAGT 
    ATTACACCGT GAAATCAGAA CCACATCAAA AACAAGAGAT AACGTTATGT 
    TCAAGTTACC TTAGGTACTT GTCTGATTCG GTAAGATATA CCCGAAAGAA 
    AAGATTCAGA GAACCAGACT TGGTGAGATA AGAATCATTT CCCATGGGCC 
    GTATCTCCAA GGCTGAGATC ATCGGCGTAG TTTCCCCAGT CTTAACAAGA 
    CAAATCTGCA ACGAGTTTGA TGTTGGGATG TGTAAGATC

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR