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Mutant Lines
16-0008-1

16-0008-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 126742 [Map]; Strand: c
  - AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
    Distance: 276; Region: intergenic
  - AT2G01240.1 - [+] show detail - Reticulon family protein
    Distance: 1698; Region: intergenic
Flanking Genome Sequence: 16-0008-1 - 5-prime edge
```
GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCAAA TCACGCACTT CACTATTGGG CCGACTTTTA 
TACTTTCCAA GTATCCATTG AGATTAGTTT CCATATGACT TTAGGCCTAC 
ATATATTGGA AAAACCCAAT AACAACAATG AAAAACTGGA GCACAATGTA 
ATGCATTAAT ATTCATTTGT GGNGATAGCA TTTTCGTACA TGAAGCT
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 122871 [Map]; Strand: w
- AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
  Distance: -405; Region: promoter
- AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
  Distance: -405; Region: promoter

GCCGGACTAA TGTTTGTACA CATGTCCTCT CCTTTTACCC TTTTAAGGCT 
TTAGCTAAAT CTAAACCACA TTTATAATCG TTTATTATAT GAATCTTCTT 
CTTGCGAAAA AACATGTCAA GCTACTATTC TAAGTAAAAT AAGAAAGATG 
AGCTTGTGAT TTATATGGTA AAGTAAGATA TAAAAGAGGT AGTACTAGTA 
CTGTAAAAGC AGACTCGAGG AATAAAGAAA GCAGGAAGAG CGTGGTGGTA 
TCTTGTGGCA CCTTTCTTCT CTAGTAAACT CCACTGTTAT GTTTGCTCTC 
TCCCAATCGT CAACTAGTTT GTTCAATGCT CATTTGAAAC TACACTCGTT 
ACTACTTGTT ACTACACTTG CTACACTCTA TTAATATGCA TCACTTGGTA 
TTTTATGGAG TTTCGTGCTA GAGCAACATC ATCTAAGAAA TAAAAAATGA 
ATGATACTAC TGTAGTAGTA ATATATTGAC AAGATAGATT AATAGAAAAG 
GACAAACACT GTAAATGTTA CCTACATTGA CACTTGACAG ATCAATCAAA 
GGACCCCAAT ATATTACTTT TCGGAATAAA ACAACAATCA TGACAAAAGG 
TATTAAAAGA TGTAACTATT TGAATAAAGA TATCTGCATT TGTAACATTT 
TGTATATAGG AGAGATTACA GAGACAAGTT GTTTTTTACG AGCTATTANC 
TTTATCGGAA TAGTGCAAAA CTGTTANAAN AACCTGTATT AA

AT2G01220.1

Model type: Protein coding
Short Description: Nucleotidylyl transferase superfamily protein
Computational Description: Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01220.2

Model type: Protein coding
Short Description: Nucleotidylyl transferase superfamily protein
Computational Description: Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01240.1

Model type: Protein coding
Short Description: Reticulon family protein
Computational Description: Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 375 Blast hits to 375 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR