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15-5139-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17460441 [Map]; Strand: w
      • AT4G37050.1 - [+] show detail - PATATIN-like protein 4
        Distance: -671; Region: promoter
    Flanking Genome Sequence: 15-5139-1 - 3-prime edge 
    NCCGTNCCGA CCGTNTTCAT CCCTACTTGG AAGTNTGATN NTCTNTGTCC 
    CTAACGGAAA TATTNTNATN GNACACCCTC NTNTACTNTT CAGCAAANTT 
    CCCTAGTNCT GCGANTTCAG TNTCTATTAG TAGTNTAAGA AGCCGGGTTT 
    AAACCNCCAA CCANAAACAT TGTACCAAAN ACCAAACNCA TTGTACCAAA 
    AAAAGTTTAC CCTTCTTCAG GATGGTNACC TANNANACTC GGAAAAAAGC 
    AATGAAAAGG AGCTAAANTA TTACTCTNNA AAAATTTCTG ACCACTGANT 
    TATAAATNNA TC

AT4G37050.1

Model type
Protein coding
Short Description
PATATIN-like protein 4
Curator Summary
Patatin-related phospholipase A. Expressed in the floral gynaecium and is induced by abscisic acid (ABA) or phosphate deficiency in roots.
Computational Description
PATATIN-like protein 4 (PLP4); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2044 Blast hits to 2033 proteins in 371 species: Archae - 0; Bacteria - 489; Metazoa - 210; Fungi - 168; Plants - 876; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink).
Link
InterPro Scan - TAIR