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Mutant Lines
15-5049-1

15-5049-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 77260 [Map]; Strand: w
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon4 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon4 (CDS)
  - AT2G01080.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
    Distance: -628; Region: promoter
Flanking Genome Sequence: 15-5049-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TNNCCGACCG TTTTCNTCAA 
TAGTCCAGAG ATAGCAAATA ATACATAGCA ACAAGAATGC GATAACATCC 
CAGAAGGCAG TTATAGTCCA AGCAGTCTGC CATCGTTCAT TGAATGGATC 
TGTTGCTTTG AAATACACCT GCACGGGGAC AAATCATCAG GCAAGCAAGC 
T
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 77324 [Map]; Strand: w
- AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: 0; Region: intron4 (CDS)
- AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: 0; Region: exon4 (3UTR)
- AT2G01080.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
  Distance: -564; Region: promoter

CTCTGGACCC CCTCGCAGAA CTCCCAAAGG TATGTTACAT CAACTTAAAA 
GGTTTTGATA CCTCTCGGGC ATACCAACAA ATAAGCATGG TTTTGTGGAA 
ACGGTTTCAG CTGAGCATGT TGTGGGAAGT CTTGGCTACA TGCTAGTGGT 
TCTTATGTAG TGGTCCAATT TTGGTGTTCC TGGGTGTGAT AGGGATGCTA 
ATATGAAACT AATGATGGAC AGATATGCAT ATTCGGGAGA CGTGGATGAA 
GAAAACGAGG AAGCTCAATC TCTGACAGGG GGGAAGCAAG ATGGTGATAT 
TAGCTTAGTT AAGCAAGAGA AGAATGCGGA GTCGGACAGG GAAGAAGATG 
TTGAAGAAGA TAAAAGAGAG TGAGGAGAGT CAGTATAGAA ACGACGTGGC 
ATCTGTGTTT GATCAAGAGT TGACGAAAAT ATAAATATCA GCAAGAGGTC 
AGCTATATAG CACAAAGCAA CGACGTAATA CATTTATATG ATGTAACTAA 
AGGATAGTAA CTGTGTGTTT GTATTTGTTT GTTTTTTTAA TATCANATCC 
AACATTTTTT GAGTCATCTC TAACCCTTGT CTGAGTGTGA GATTTGCCTA 
AAATTGCTGN AAATTACATT ATTGATATTT TTATTGGTGG NTAAAATTGT 
GAAACATTAA TTTGNCANTA ATACTANAGT CCANACACGG AAACAGGG

AT2G01070.1

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.2

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01080.1

Model type: Protein coding
Short Description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G27080.2); Has 675 Blast hits to 674 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 673; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR