Home
Mutant Lines
15-4560-1

15-4560-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 2959360 [Map]; Strand: c
- AT1G09170.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
  Distance: 0; Region: exon11 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAT NAAAGTATGG NNAAGAAGGT GAAAANTNAT NCACCTTCNA 
CACAGTGTTT GGCCCTTCAT CATNTCAAGG NGATTCAATT CCTGANATGT 
ATTNATCCTT CTNCTCATTN CTACATATGA TCAATATGCA TCTAANNCTT 
GTATAGACAT CATGATCAAT ATGTATCTAT ATNTGATCTT CCTTGAAAAC 
TATTGGTTTT TAGTTATTTT ANGTNGCCTC TTACAGAAAC GTNCTAACTT 
TCTATATGTA GGAGGCAGAG TATGCAGACA CGTCAACCTC TGATCCGGAC 
TGTNCTTGAN GGCTATAATG TATGCATATT NGCATACGGC CAAACAGGAT 
C

3 prime edge [+] show sequence

Chromosome: 1; Position: 2873789 [Map]; Strand: c
- AT1G08930.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT1G08930.2 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon1 (CDS)

CTCAAAACGA CGATGGTGAA TGTCGTGTTA CCGCCTCTGT TTTCCTCAGC 
ACCTTTGTTG CCGTATCAGG CTCCTTCTGT ACCGGTTGTG GCAGTGAGTC 
TTCTTCTTTT CTTGATTCAA TCTCGGTTCA TACCAACCGA TTTTCATATC 
TTCCGAGTTT CGGTTTGACT CTGAATTTGA AGGTGAATTT ACTGAACCGG 
CTTAATTTCT CGGTTTTGTA GGTTGGTTTT TCATCGGGTG CACAAGCAGG 
GATTACCAAA GATTTATCTC TCTCCGTTGC AGAAGTATGT AATCAATAAT 
CTTTAGTTAC TTCAACATGT AATTACTTCT ATATTGACCG TATTTAATTG 
ATTTTACAGT ACTCAATGTT CGGGTCGATC TTGACATTAG GAGGCTTGAT 
CGGTGCAGTA TTCAGCGGTA AAGTCGCTGA TGTCTTGGGA AGAAAACGGG 
TAAGAAGATT AATACAAGTA GATGGAAAAA AAAAAAAAAA TANAANAAAN 
TTNGGGTTTN NANTTTTGGG AANCCAANCC NAANNNCNGN CNNNGGGGGG 
GGNNNNNCNN AACACCGGGT TTAANTTTAA NCNTTTTNCC CCCTTTTTTT 
TTAAAAAAAN ANAGGGTNTT NNGAAANNAN NAANNNNAGN NGNGNNANAN 
CCCNTCNCNT TT

AT1G08930.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Curator Summary: encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.
Computational Description: EARLY RESPONSE TO DEHYDRATION 6 (ERD6); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sugar transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to chitin, response to abscisic acid stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: ERD (early response to dehydration) six-like 1 (TAIR:AT1G08920.1); Has 27777 Blast hits to 27182 proteins in 2058 species: Archae - 500; Bacteria - 11725; Metazoa - 4936; Fungi - 6599; Plants - 2746; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08930.2

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Curator Summary: encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.
Computational Description: EARLY RESPONSE TO DEHYDRATION 6 (ERD6); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sugar transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to chitin, response to abscisic acid stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: ERD (early response to dehydration) six-like 1 (TAIR:AT1G08920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G09170.1

Model type: Protein coding
Short Description: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: shoot, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11983 Blast hits to 11146 proteins in 466 species: Archae - 0; Bacteria - 101; Metazoa - 5767; Fungi - 1479; Plants - 1905; Viruses - 0; Other Eukaryotes - 2731 (source: NCBI BLink).
Link: InterPro Scan - TAIR