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Mutant Lines
15-4376-1

15-4376-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 4111594 [Map]; Strand: w
- AT3G12910.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
  Distance: 946; Region: intergenic
- AT3G12915.2 - [+] show detail - Ribosomal protein S5/Elongation factor G/III/V family protein
  Distance: -1035; Region: intergenic

CATTTAGATC CATGTCTCTT TGCTTTAATT GGTCACAATG CTTCTTCTGG 
TTTTATTGCA GCGGAAACGG TTTATTGAAC AAACGAAGAC TCTTTATGGT 
ATGAATTTCC TGGCATCTGT TTCAAGTTTA CNTTTCTAAA ACCTGGAAGT 
TCGGCACATG AGCAGTTCCT TTTAGAACAG TTTGTTTACT TAAACCTTTG 
ACGCCCTTTT GTGTACTGGT ATAAACCTCC TGCCTCTTCT CTCATCTGTT 
TCAGGCTTCG ATTCCACCCT TCATATTACA GTCGCAATTA CAAACTAGTG 
TCAATGAGAG AACCCAATTC GATCAGAGGT ATGCTTTCTC TTCTTGACAA 
CAAGTAAAGT AAACAGGGTT TCTGTTTCTC CACTTCCTTT TATGGTTTTG 
GTTTTGAAAA GTGAAATCTT TATGTGAAAG TTCCATTTTT TTGTTTTAAT 
AGGATTTGAG ATTAATGAGT AATTTAAAAT AAGTGAGCCT ATTTAGGCCC 
TAAAGACAAA AAAAAATCCT AACTTTTTGT CTTTTTTTAT TAAACTAAAA 
TATCAGGGTC ATGATTNACA ATCTTTATTT TTTCTTGATA CTTTNCATGA 
TTTTAGTTNG TAAAAAAAAA TGTTTNAANT CNTAANCCAN TANCNCCNTA 
NTGGAAATCT TTAAAAATCN TANATNCNTT NGNTTNANTT NAAAAACATC 
AATTTTAAAG ACTTTATA

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 4111478 [Map]; Strand: w
  - AT3G12910.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
    Distance: 830; Region: intergenic
  - AT3G12915.2 - [+] show detail - Ribosomal protein S5/Elongation factor G/III/V family protein
    Distance: -1151; Region: intergenic
Flanking Genome Sequence: 15-4376-1 - 3-prime edge
```
TCTAAATGAG ACTCTAACAA AGCTGCAAAA GGAAAAAACA AAGGTCATCA 
GACACGGAAT AGCCAAATGC AGCAGAATAA GAACCCAACT TACAAAGTAC 
AAGACGGAAA TTACTACACA ATCAATCACA CNGTACATAG TTGGCTACTG 
GATAACCAGT GGAATCAGTC AGTAAAATGA TATCAGACTA CTCGATTGCA 
TGATTTGAAG TATAAAGCT
```

AT3G12910.1

Model type: Protein coding
Short Description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 42 (TAIR:AT2G43000.1); Has 2920 Blast hits to 2915 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G12915.2

Model type: Protein coding
Short Description: Ribosomal protein S5/Elongation factor G/III/V family protein
Computational Description: Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1).
Link: InterPro Scan - TAIR