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15-4189-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 99239 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: -2584; Region: intergenic
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -1410; Region: intergenic
    Flanking Genome Sequence: 15-4189-1 - 5-prime edge
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGT TATTCAGAAA ACATAATTAA AATAGAAATT
    GAAGGTGTAG GTGTGTGGTT TAGTCATCGA TATAGCCAAC CAGTGACAAC
    CACCTCGACT CTCTTTGACC TAATTATTTG ACCACTCCTT CCACTTTACA
    TCATAAAATC TGAAACCACT TACCATCTCT CGTCACATAG CTAGCAGACG
    ATCGTCTTCA TTATGTGGTT GTGACTCTCA TTCTAATGTA ATCCTGGTAA
    AAATAGCATG CGAGTGTCTT ATCGATCCTC GTTGGTTATA TGATAAATCA
    TTTATTNTAA AATAACCAAA CCNCACCTAA TATTTTTTGG CATTAAAAAT
    TTAAAATTTT TTAAAAGGAG NGATGGTTCC ACCAAAATTT TTTTTNTTTN
    NTTGNACCTG AAGGGGNAAG GGGGCCNNNT TTNGGGNGGG GGGGGGAAAA
    TTTGAATTAA ANGNTTTTTT GGGGGGGGNG GGAANGGGGN AANNAAAATT
    NTTTNTTTNC CNTTTTTNNC CCNCCGGGGN NNCGGGNGNT TTTTGGGGGG
    AAAAAANAAA CNCCCNGNNN TTTTNNNNAA AAANAAAAAA AAAAANTTTT
    TGGGGGGNGG NGGGNNCCNN AAAAAANNAA ANAAAAAAAA CNNGGGGGNT
    TNNNNNNNNN GNNNNNNNAC CNCNNCCCC

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR