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Mutant Lines
15-3678-1

15-3678-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 460501 [Map]; Strand: w
- AT4G01060.2 - [+] show detail - CAPRICE-like MYB3
  Distance: 0; Region: exon1 (5UTR)
- AT4G01060.3 - [+] show detail - CAPRICE-like MYB3
  Distance: 0; Region: exon1 (5UTR)
- AT4G01060.1 - [+] show detail - CAPRICE-like MYB3
  Distance: -30; Region: promoter

AATAGAAATG ATGGTTCGTG TGCAACCTTC AAAATACGAC CACTCTCTCT 
TAGTTTCTTT CTTCTTCTTC TTTGTAATAC CGTGCTGTCT GACATGGATA 
ACCATCGCAG GACTAAGCAA ACCAAGACCA ACTCCATCGT GACTTCTTCT 
TCTGAAGGAG GTAAGCTGAA AACTTAAACA CCTTCGTTTT CTAATTTTTC 
CAAGTTTTTT TTAAAACTTT TCTCTATATA TAATGAGAAA ACTGAATTTT 
GGTGGCGACA AGGAACAGAA GTGAGTAGTC TTGAGTGGGA AGTTGTGAAC 
ATGAGTCAAG AAGAANAGGA TTTGGTCTCT AGAATGCATA AGCT

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 460385 [Map]; Strand: w
  - AT4G01060.2 - [+] show detail - CAPRICE-like MYB3
    Distance: -87; Region: promoter
  - AT4G01060.3 - [+] show detail - CAPRICE-like MYB3
    Distance: -90; Region: promoter
  - AT4G01060.1 - [+] show detail - CAPRICE-like MYB3
    Distance: -146; Region: promoter
Flanking Genome Sequence: 15-3678-1 - 3-prime edge
```
TTTCTATTTA TAGCAACTAA CCAAATCAAG TAACCAACGG TCCAACGGGT 
TTGGTCGGTT TCTATGTTAA TTTACTAAAT TGGTTTTGTT CTCATTAATT 
AAATTAATTA ATTGTTATTG CAAGTTGCAA GTTTGCAACC AATAAAAACC 
ACAAGTACCC GTGACTTCAT TTACTACGTT GTGATGGCTT GGACTGGAAC 
ATAAGTTGTA TAAATATTGA TACAAGCCGT TAATTAAGAT CATTAATAAT 
CAACAACAAT TGTTTTCAAA GCT
```

AT4G01060.1

Model type: Protein coding
Short Description: CAPRICE-like MYB3
Curator Summary: Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description: CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 2727 Blast hits to 2727 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2715; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01060.2

Model type: Protein coding
Short Description: CAPRICE-like MYB3
Curator Summary: Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description: CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01060.3

Model type: Protein coding
Short Description: CAPRICE-like MYB3
Curator Summary: Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description: CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR