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15-3471-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7513449 [Map]; Strand: w
      • AT1G21460.1 - [+] show detail - Nodulin MtN3 family protein
        Distance: -88; Region: promoter
    Flanking Genome Sequence: 15-3471-1 - 5-prime edge 
    CAAGCGTATA TATATCGAGA TTCAGCGTGT GTTAACCGCT TCACTGTGGA 
    ACACCAATAA TTACAAAATT AATAAAAGTA TAATAAATTA TGAAATAATG 
    GTATTAAATA TTAAATTTTA AAAATACATG GTTCTGTTAT TAATTTTTGT 
    AGTATGAATA AAATTTGAAA AAAAAGTTAT GGTTAAGAAC TAATGTTTTG 
    AGAAAACCTA AGTTTTAAAT TTGAGTTAAT TGAGTTATTT CTTATATAAA 
    AAAAAAAANG TCCCCANNAT TTNAANTNNC NACCCGGGNC CGNNANCCNC 
    CCNNNCCCTN NANNNNAAAA AAAAANNNGG GGGGGGGNNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7513351 [Map]; Strand: w
      • AT1G21460.1 - [+] show detail - Nodulin MtN3 family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3471-1 - 3-prime edge 
    TTTNNTNGCC GATCCANANT ANNNGACTGA TAGANNACTC ACNTTNCTNT 
    CTCAGGNTGA CGGAACAAGC NAAGCAAAGA CCGAACCTTT TAGCCACCCT 
    TTGAGATCNN AAGATGAACA TCAGTGTCAN ACTATCGTGC NGNTGTGNNT 
    CNGGNAGCAG NTTCATTNNG CTCANCCCTN TCTCTCTGTC NTTCTATCTT 
    NTTNGNGTTT CTTCCATGAG AAATCANTGA GAGTACTACT AATCCGCTTG 
    GGNGGATTTT CTACCTTTTT ACANGAAATG CAACATGNTC TGATTCTTTT 
    CTTGGCTCCT TCGNACNTAT CACTTTATNT CTTATATAGT GAACCGNNTT 
    ATGATNCTAT CGATNNCTTG TNTGGTCTGG TCTGGAAAAA AAAACCTCNN 
    NATNTTTNNT TGTNNGGGAA NGANTTTGNG GNTCNCCNCC ANNNANAAAN 
    ATGAANNATC TAAATNTCAN CNNANCACTC GTCTGGANCC ACCNTNNNNG 
    NAAGNATTNA TANTGGANNT GGTGTNCNTT TTGNTTNGAG NNGANAAANT 
    GACCCNCTTT NAGCGCGACT AAAGNTNNNN NNTGANANNA TTANNGATNC 
    GNGGGNTNGN TNNCNTNGCN NANNGNGCNT CANGNGNGTN NNATNNNGGT 
    NNGGGGCCTN GCNNNNNGGN ANATAACGAC ACNNCNCNNN NGANGNCCAN 
    TNNNTNNNNT NANGNNCATN TGNGCAAAGC CGNGNTNNNT GNNTATNNNN 
    CNTTCTNTCT NNCCANNNGN GCNANCGTAA NGNTGCAACN TNNNNGTTNT 
    CGNTGTGTGG GTCT

AT1G21460.1

Model type
Protein coding
Short Description
Nodulin MtN3 family protein
Computational Description
Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Link
InterPro Scan - TAIR