1. Home
  2. Mutant Lines
  3. 15-3323-1

15-3323-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59157 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3323-1 - 5-prime edge 
    GTTCAAANGG NGCGGNCANC AGNACACCAT CAANAATCNN GNACNGNTCN 
    TCNTGAAGCN CNNCNTANTA TNCTTGTTNT NCNGTGATGN GATGNGGAGA 
    GGCGANGCAT ATTGNATGCA GTGCAAGATA TTAAAGNGGC AAAGTGGGCT 
    TCCTCCTTTC TTTTTCTCTC TTATTTCCGT TTCCTATCAT TTTCCCTTTG 
    TCATTAACTT AGCTGATTAA ACAATTCATC AGCTTCTCTT ACACAACATT 
    TTGTTAATCT TTGCTTTCTA ATCTTAACTA TGTCTTCTAT TACAACCCCA 
    CTCTTACATC ACGCGCGTGG CTTGCAAACT CCTTTCAGTG ACATGAACAT 
    GATGGTAAAC AAAAATACTA AATGTTATGA TATATTTTTA AATATTGTAT 
    TTGTCTTCTT GAATTACTAG AAACTATTAA AAAAAAAAAA ATTTNCCCCA 
    TNTTTTTNGA GGNGGAACNG GNNATTAAAA NGNCATAAAA CTGGCCCAAA 
    AAAAAAAANG NNGGNGCAAA NNTGGGGGAN AGGTTNGGGT NTNCNAAAAN 
    NNATTNNAAA AAAAAAAAAN TTNGGGGGGN CCAAAAAAAA TNNGNAAATA 
    NNTTTNNTNN NNGTTTAACN AAANAGGGGG GGGGGCNANN NCCCTTNGGG 
    GNGAANTNTT CCCCCNNNAN ANNTTTTNAG GGGGGNGNAA AAANCCNCCN 
    NNCGGGNNNN NCAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59050 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3323-1 - 3-prime edge 
    CTTNGANCAG NCTCGAGNGG AANGGGATNN CNGGCNCNTT TTCTNNCTNN 
    NCCCTCCTAT CCTGCNACTT NCNNNNNTAC CAGCNTGGGN NCCATGANCA 
    CAGCGTAGCA GGNNGGAGAA NAAGAANAGG AAGAAGTTCC ATGCGGCGGA 
    GCCTACCTCT GTTCTGGACT CCCTCATAAG CCCAACCTCT TCCTCCACGG 
    TGTC

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR