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15-2585-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163278 [Map]; Strand: w
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -676; Region: promoter
    Flanking Genome Sequence: 15-2585-1 - 5-prime edge
    AATACTAGGG ACCCTCGATA TAATCTAAAG AGCGTTAGGT TTTTGTAAAA 
    TACAATTTTG GAGTTTATGG TCATATTTTT CTTTTCTTAC CTCTTCTTTA
    TTATTTCGTC TTGTTTATAT TTTAGTAAGT CTAAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163162 [Map]; Strand: w
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -792; Region: promoter
    Flanking Genome Sequence: 15-2585-1 - 3-prime edge
    CTAGTATTTA AAAGGAAAAT AATAGTGATA AAAGTGCTAA CTTTTGTGGG 
    AAATGGATTC TAGGTTGAAA AAAACAGGAC TTTTGTAAGC AATTTTCAAC
    TTGACAACAT CATGCGGATG CGCGGTACAA GTCTTCTACT CTTGTGGACC
    ATATTAATGC TTTGATTAGA TTGATATAAT ACTCATGCAT TATAAGCT

AT2G01340.1

Model type
Protein coding
Curator Summary
Encodes a protein whose expression is responsive to nematode infection.
Computational Description
At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR