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15-2576-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59093 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2576-1 - 5-prime edge 
    CGACGGTGGT TGGGGGAAGG AAGACGAGAA AGAAGAGAAA CAAGAAATCC 
    CCTTCCCTTG AAACTCTTCA AAGGGTAAGG GCATTGCAGA CGATAAAAAA 
    TAGTGTATTT GTCTTCTTGA AGCTCTTCTT CTTCTTCTTC TTCTTCGTTG 
    TTGTGATGTG GTGTGGTGAG GTATATTGGA TGCGTGCAAG ATATTAAAGT 
    GGCAAAGTGG GCTTCCTCCT TTCTTTTTCT CTCTTATTTC CGTTTCCTAT 
    CATTTTCCCT TTGTCATTAA CTTAGCTGAT TAAACAATTC ATCAGCTTCT 
    CTTACACAAC ATTTTGTTAA TCTTTGCTTT CTAATCTTAA CTATGTCTTC 
    TATTACAACC CCACTCTTAC ATCACGCGCG TGGCTTGCAA ACTCCTTTCA 
    GTGACATGAA CATGATGGTA AACAAAAATA CTAAATGTTA TGATATATTT 
    TTAAATATTG TATTTGTCTT CTTGAATTAC TAGAAACTAT TAAAAAAAAA 
    AACATTTCCC CCANNTTTTT NNANGTNGNN CNNGTNTTTT TAAANGTCAT 
    AAAACTNGCC CAAAAAAAAA AAAGGGGNNN TNAANTTTTG GGNNNNGNNN 
    NGGNNNNCNA AAAAANNTTN NNNANAAAAA AANCTTTGGG GNTGNNAAAA 
    ANNTTGGGGA ANNG

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR