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15-2409-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 138428 [Map]; Strand: c
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -622; Region: promoter
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -622; Region: promoter
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -625; Region: promoter
      • AT2G01270.1 - [+] show detail - quiescin-sulfhydryl oxidase 2
        Distance: -903; Region: promoter
    Flanking Genome Sequence: 15-2409-1 - 5-prime edge 
    AAATGCAGAG TCAGGTGCTC AATAATATTG TGAAAATTCA TTCATTTCAC 
    TTATCAAAAA ACTCCTTATA ATCTCATATA AGTGTTACTA AATACATGAA 
    TATATATGTT CTGATACGTT TATGTCATTG TCAATGAATG ATGAATGTAG 
    TTGGTGTACA TGCATTAGTC GAATCTTCAA TGGTAGTATA GTTTTTGATT 
    ACTCTTGAAC ATTGTGAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 229386 [Map]; Strand: w
      • AT2G01505.1 - [+] show detail - CLAVATA3/ESR-RELATED 16
        Distance: -149; Region: promoter
    Flanking Genome Sequence: 15-2409-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    ACCTGCTCTG CACTTCACAG ACACCGACAA AAAGAGAAAC CAATTTCTGC 
    CACAAGAAAA CAGAGATAGA TACAAACTCA AAACACTCTG TTTTTCACTA 
    CCTCATGGTC TTCTCATAAA AAGCT

AT2G01260.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01270.1

Model type
Protein coding
Short Description
quiescin-sulfhydryl oxidase 2
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.
Computational Description
quiescin-sulfhydryl oxidase 2 (QSOX2); FUNCTIONS IN: thiol oxidase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 1 (TAIR:AT1G15020.1); Has 2833 Blast hits to 2194 proteins in 312 species: Archae - 22; Bacteria - 32; Metazoa - 1533; Fungi - 396; Plants - 476; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01505.1

Model type
Protein coding
Short Description
CLAVATA3/ESR-RELATED 16
Curator Summary
Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
Computational Description
CLAVATA3/ESR-RELATED 16 (CLE16); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR