Home
Mutant Lines
15-2084-1

15-2084-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 161907 [Map]; Strand: c
- AT2G01330.2 - [+] show detail - nucleotide binding
  Distance: -1006; Region: intergenic
- AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
  Distance: -2047; Region: intergenic

ATCATATGTA CATCGTGGTT CAAATTAAAC AGCTCGAATA CACATTATCA 
AAACGTGCTT TATCCATATT TGTCAAATTT GTGTCTTATC CGGGGGAAAT 
AAATAATTCA ATTTCCAAGT CTAGTTAATT AAATTTCAAA ACCTTGTTAA 
TCTCCATTGA TGACCCATCC GATAACCAAA TAAAATGGAT TGCGAATGAA 
CCAATCATAT ACGTACAGAT TACTTTCTAT GATGAATTAA GAAACCAATT 
ATATCAATGT GTGACTAACT AGTCAAAAAT GATCAAACGT GTCTCAAAAG 
TATATATTTA ATGCTAGGTA GTGTGATTTA ACAATTGAGA GAACAAAAAC 
AAAAAACATA CCAAATGATA GTTTCGGTTT ATATCCATTC GGTTATCAAT 
TCGTATCCAT TCGATTATCA ATTCGGTTCA GATTTTTATT TATTCGGTTT 
CGGTTTGTAT CCATTCGATT ATCAGATATT TTGGTTATAA AGTTTAGTAT 
CCATTCGATT ATTTTGAAAT TTTGGTTAGA TTTCGGTTCG GATC

AT2G01330.2

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1).
Link: InterPro Scan - TAIR

AT2G01340.1

Model type: Protein coding
Curator Summary: Encodes a protein whose expression is responsive to nematode infection.
Computational Description: At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR