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15-1048-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 127990 [Map]; Strand: c
      • AT4G00300.1 - [+] show detail - fringe-related protein
        Distance: 0; Region: exon2 (CDS)
      • AT4G00300.2 - [+] show detail - fringe-related protein
        Distance: -596; Region: promoter
    Flanking Genome Sequence: 15-1048-1 - 5-prime edge 
    GNTTGCTCNA CCTATCCGGA GTAGGCTTTT TGTAGACAAA TATNNGATTG 
    ATCTCGGAAG GATC

AT4G00300.1

Model type
Protein coding
Short Description
fringe-related protein
Computational Description
fringe-related protein; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G01570.1); Has 958 Blast hits to 946 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 87; Fungi - 151; Plants - 707; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00300.2

Model type
Protein coding
Short Description
fringe-related protein
Computational Description
fringe-related protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24010.1).
Link
InterPro Scan - TAIR