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Mutant Lines
15-0615-1

15-0615-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 84531 [Map]; Strand: w
  - AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 15-0615-1 - 3-prime edge
```
GGCGTGAGCT GACCAGGAGA AATCTGTTCT TGTGTTTAGT TCAATTCTCG 
GCTGAGGAAC GTTGACTGTT GACTGATAGA GCAACTTCAG TGTGTTGAGA 
CCAAACATAA AGCT
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 84647 [Map]; Strand: w
- AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
  Distance: 0; Region: exon1 (5UTR)

CTCACGCCGG AGAAGTTCTC AACGGTATTT TCCGGGAAAA AATCAGATTT 
ATATGATCCA AACAAGAAGA AGAAAAAAAA ACATAGTGTC CCCAGTTGAA 
AACAGAGTAG AAAGAAAACA AAAAACCAGA TCGTAAAAAA AAAAAAAANN 
NGGNNAAAAA NTTGGGTTTT NGNAAAAAAA ANTTNCCAAA AANANTTTTT 
TTTTTTTTTN GGGGTAAAAA AAAAACCCNC CGGGNANTTN GGGNNAAAAA 
ANNTTTCCCN NNNGGGGTTN NTTTAAAAAA AAAAAAAAAA ANTTNNCCCC 
NNGGGGGNNN TTTTTTTTTN GNNNNNNNNT TTTTTTTTNA NAAANAAAAA 
ANNTTTTTTT TTNNNNNAAN TTTTTTTTNN NGGNNCCCCN NAAANTTTTN 
NNGNNGGGGG NNGGGGNCCC CNNAAAANNN AANGGGGNNG GGGGGGNANN 
AAAANNCNNG GGGGGGGGNN CNTTTTNGNN NTNNGGGTTT TTTTTNANNN 
NCCCNNNCCN TTTTTTTTTT TNGGGGNCCC CCCNNNAAAA AAAAAAAAAA 
NCNNGGGGGN NNAAAAAANN GGGGGGGGNA AAAAAAANNT TTNCNNNTNN 
TNTNNNGGNN ANNNGCNNNA NAAAAANTTT NNNNNGGGGG GGGGGNNNNC 
CNNNNNNNTT TT

AT4G00200.1

Model type: Protein coding
Short Description: AT hook motif DNA-binding family protein
Computational Description: AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 772 Blast hits to 768 proteins in 34 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 0; Plants - 749; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR