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15-0542-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 111838 [Map]; Strand: c
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -3227; Region: intergenic
      • AT2G01190.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: -3137; Region: intergenic
    Flanking Genome Sequence: 15-0542-1 - 3-prime edge 
    NTTTAAAACG NCAGAGGTAT TTTACTGACC GTTACCGACC GTTTTCATCA 
    TCATTTTCAT AATTTAGGTC AAAGACGTTT TTTATGTTGG TGCATAAATA 
    AAAAGGGTAG TAAAGTGCAA AAGACTAGAA ATGTGGGGGA GTAGTGCAAA 
    AGATTAAGAG TAGGGGTTTA TCGATGATTA ACTTTGTTCG TTAGGTGTAA 
    TTATCATTAG ACTTTGCAAA ATGCAAACTG TAACGAATGC TTGCATGAGC 
    GCCGTCTGGA GCTTTGACGC GAGTCTTACC CACGACCCTT TCTTTGACTC 
    TCCAACAGAG GTCGAATCCA ATGCAAACCA CTAGCTTCTT CATGTCTGTG 
    GCAATTTCTT TGGTTGAAAC CATTAATGTC ATCTTATGTT ATTCAATTTG 
    TAAATATTAT GATTTATGAA GGTGTTAGGC AGAGGGTGAA TATTAAGAAC 
    ACCTTCAATG GGGATTTCTA AACAAATAAT AAAAAAATTA TATGATTTAA 
    ATATTACATG AGTCTCTTAA ATTTGATGAA ACCTAAGCCA ATTGTTTCTT 
    AACTAAAAGA TAATTAGTCT TGGTTTCACC AAATTTAAGA GACCCATAAT 
    TAAAAATATT ATTTATCTAT ATTTACATTT TAATTTTGTT TAAGAAGGGT 
    TTTTAGGTAG TTCTTATGCA TATGAAAGTA GAATAGGAAG ATNGAGAATA 
    AAAAAAACTC TTAGGCTAAG TTTCTTTAAA TNTAAAAAAT CCTTCATTAA 
    AAATTATGAT TTATCTATAC TTATACTTTA ATTTATTTNA AAAACCTATG

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01190.1

Model type
Protein coding
Short Description
Octicosapeptide/Phox/Bem1p family protein
Computational Description
Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink).
Link
InterPro Scan - TAIR