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15-0348-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23319475 [Map]; Strand: w
      • AT3G63110.1 - [+] show detail - isopentenyltransferase 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-0348-1 - 3-prime edge 
    ATAAGAAGAT ATACAAGCCT ACCAAACATA ACAAAACATA TTTAAAACAC 
    CAGCAAGTTT ATATTGCAAA GCGTTTCATC ATGATCATGA AGATATCTAT 
    GGCTATGTGC AAACAACCAT TGCCTCCTTC GCCGACTTTA GACTTCCCTC 
    CAGCGAGATT TGGTCCCAAT ATGCTAACTC TAAACCCATA CGGTCCAAAG 
    GACAAAGTTG TGGTCATCAT GGGTGCTACC GGGACAGGCA AGTCACGACT 
    CTCCGTGGAT ATAGCCACAC GTTTTCGGGC TGAGATCATA AACTCAGACA 
    AGATACAAGT CCACCAAGGT CTAGACATTG TAACCAACAA GATCACGAGC 
    GAGGAGAGCT GCGGGGTACC GCACCATCTC CTCGGCGTCT TGCCGCCTGA 
    AGCCGACTTA ACCGCCGCGA ATTACTGTCA CATGGCGAAT CTCTCCATTG 
    AATCCGTCCT AAACCGTGGA AAGCTACCAN CCCGGGCCGN NNACCACNCN 
    TGCNNNT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23319591 [Map]; Strand: w
      • AT3G63110.1 - [+] show detail - isopentenyltransferase 3
        Distance: -51; Region: promoter
    Flanking Genome Sequence: 15-0348-1 - 5-prime edge 
    CTTCTTATAT ATGAAATGTT CAGGTGACTT TGCATGAAGG ATATGATTTA 
    TATATATAGG GTCACACACT TAGTAAATGG CCACTGTACG AATGATATAC 
    GACAAGTTGG CTCGCCCCTT TTTTAATTAA TTGGTCAAAC CTGTTGTTTT 
    ATTTTACTTT ATTCTCCTCT AATTCTATTT AGACTGGCCA AATATTTGAT 
    CCGCGTGCAA TGCAGATGAT ATATATTGAT AATGTCACAA TCAAACGTAA 
    ACTTCTATTA CGTTTGATGT GAAGTTAAGA TACGATTTTT TTTCTAGGAA 
    AATAACGATT ATATGCGAGG CANAAAGTTT TAANAAGCAT TTCTCTTCTT 
    TTTAATAAAA ATATATATGG GTTATTTTTT TTNGANGGGT TATNGNCTAA 
    NCTCATANNA TATTGGTTTT NAATANATTT TATCANGTTA TTANAGCAGN 
    CNCAANGAAA AACTCGGCAA TTNCCTNGGA NGGATGGACA TTNTTTAACT 
    AAAANCATTT AAAAAATTAG GTTATNATGC TTCCTCCTCA NGATNGGCCT 
    ATNAAATATT ATNTGTNTAN AAATNTTCTG AATCCCCTAA TTTCATAAAA 
    AAAANTTATG CCNANGGGAT NCTATCTCAN ATTNNGAATT ANCANAAGGT 
    NGTTTNTATT NGGAGAATAA TANAAAGGTT TTTTNGGGCC CGNCCTTAAT 
    GAAACGGGNA GGCAAATTNG TTGTNCAACN NGCAANG

AT3G63110.1

Model type
Protein coding
Short Description
isopentenyltransferase 3
Curator Summary
Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.
Computational Description
isopentenyltransferase 3 (IPT3); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR