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15-0270-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 123381 [Map]; Strand: w
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0270-1 - 5-prime edge
    GCTGCGATCC GTACCGTCGT CGAAGCCATT CACTCATCTC CGACGCANGC 
    CGTCGTCTAT CTTTGCGGNG GGGCCTCTCT GGTTTCACTC TCTCTCTTTA
    TGANTGATTC GTATATACAC AAATATGNGA NTGCTCTGNG CTTTTGAGNG
    ANCGAAAATG AATTANCAAN CCNGGNCGGG GAAAAANCCC NCCCNCTNAA
    AAAANGGNNN NNNANNGNGG GNGGNNNNNN NNAAANNNCG GGGGGGGGNA
    AAAAAAGGGG NNNNNAAGGN GGGGGAGNAA AAAAGNGGNN NGGGNGNNCA
    NNNNANNANN NNGNGNGNGG NGAGNNANNG NANGANANGA ANAANNGGNN
    NNGGNNNGNG NGNNNANGNG GGGGGGNGGG GGGGNAAGNN GNNGAAGAGG
    NANGANNANA AANNAAAGGA AANNGNNAAA AACNNNGGAN GGNGAGGNNN
    GNGNGNNNAN NAGAGNGGGA NAGNNGNANA GANGAGNGGG ANNAAGGNGA
    NNAAAANNAG NNGNNNGAAN GANNGAGANA NNAGNGNGNG NNGAGAANAA
    AGAGGGGTNG TGGAAGANAN ANNGNANNAG GANNNNGGNG ANGAGNANAA
    NGNTGGNNGA ANNGAGGCGG CGGNAGGNGA GAGGNNGAAA GNGAANNGGN
    TGAGNAAANA NAGANAAANG AANNNNGNAT NANGNNAANN AAAGNGNNNG
    AAAAGAANNN NAAGAGAANG GGGGAGANAG GGAGNNAGGN GANAAGGNNA
    G

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR