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15-0254-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 281165 [Map]; Strand: c
      • AT2G01630.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: exon2 (CDS)
      • AT2G01630.2 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-0254-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA GGNTCTGAAG TGACNNACAN GCCNNGNCCA 
    ANACAAGNCG TAGCACGTCC TCAAAGTCAC AGANCATNAA CCGCGTCCGC 
    CTTNATGACT GCATNACCGC TCAATGCTGG NAGCGTTNGC TCACACCNGG 
    GGNTCAAGTT ATAATCTCAG TACCTAACGA CCAGCTTCTG NGGTNTCAGC 
    CAATCAAATG CAACCGCAGC CAATTGGGTG ACTAGAAATG TAGCTGCATA 
    TTACCCTGCG ACCAACATTA CCACAATTGC TGTCGGATCA GAAGTCCTAA 
    CCAGCCTAAC AAACGCAGCT TCTGTCCTTG TCTCAGCCCT CAAATACATA 
    CAAGCTGCTC TCGTCACGGC CAATCTCGAC CGTCAGATCA AAGTATCGAC 
    ACCGNACTCT TNAACCATCA TTCTTGATTC TTTCCCTCCT TNGNAAGCT

AT2G01630.1

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2926 Blast hits to 2856 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 93; Plants - 2819; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01630.2

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR