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13-6044-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3624925 [Map]; Strand: w
      • AT1G10880.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-6044-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAC 
    AAGAAGGCTG TTATATCATT TGCGTCTGGG GAACGAGAGA TTAATATCCA 
    TGTGAGAAAC CCTTATCACA TATATATCCT TAGTTTGATC TATGATTATT 
    AATGATTTCA AAGTGTTATA CAAACAGATC TTCTTTTACT ATATAATACA 
    GAATCTAAAC CATCAGATGT TACACAATGC GCATTGTATG GATGGTGGTG 
    AGAGACGCCT TCTTAAGATG CTGAATCCAA ATAAGGATAT CGACTCTGGT 
    TCATCGCTTG CACAAGTTGA AGAACAGGTT AATTAGTGTA ACAAATTTCT 
    ATTATACTAT TAAAAATTGA AGGTGTCGTT GTACTTTGCA TGTGTTTTAC 
    CAAGTTCGAT GTTTTTCTAA TTAATCTGTT TATTATTGAT CTAGAGCAGA 
    TGTGGAATTT ATATACTTTC AAGAAATGGC CATATTTAAA TACCACAAGC 
    ACAATCACAA TCGATGAAGA AACATATAGT AGGAAGCAAA GGGAATTTGA 
    ATGTGAGAGA GATCAAGTGT TTGTTAATGC TCCTTCTAAA GCCTCTCTGT 
    GGAAATCGTT ACCTTCTACC AAGGACTTAC GCGACCAGAT TCAGGTCTAA 
    CCGGATTTCT TGATTCCATT TTATTATGAA TATATGATTT ACCGAATTAG 
    CCAATTCTGT AATATACTAT ACAGGCAATG GAGTTAAAAG GTGACAAAAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3624932 [Map]; Strand: w
      • AT1G10880.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-6044-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATTGTC ACGATATGCG TTGTTAGCAA AAGTTAGTTT 
    GTCTAGCACC ATCTTCTCAG GGCACTTTGA TCGAAAGTAC ACTATCGGCT 
    GGTAATCCTC AATCGGTCTC CATCTATGGT TCAAGTTGTA TTCTAGTCCT 
    GATATGTACN TGTTCAAGAA CAAGCTGTGC TTGAGAGTAA CATTCACCAG 
    CTTAGTTAAT TTGATCCACA ATAATAAATA TAGAATCAAC GATTTCATAA 
    CAAACATACC GTTTTCTCTC TGATTTCTTT GTCGATTTGA AGCATTTGTT 
    GTTGCATCTC TTTTACCATA TTCTCGTTCT CTTCTATTGA CTTCGCATAG 
    TGGTATTGAT TCCTCTTGGA TC

AT1G10880.1

Model type
Protein coding
Short Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Curator Summary
Putative role in response to salt stress. Mutants grow larger than the wild type under salt stress condition (Ann Stapleton and Ashley Green, 2009, personal communication).
Computational Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G16170.1); Has 696 Blast hits to 692 proteins in 56 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 7; Plants - 576; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Link
InterPro Scan - TAIR