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Mutant Lines
13-5617-1

13-5617-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 69648 [Map]; Strand: c
- AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 0; Region: exon1 (CDS)
- AT4G00165.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 0; Region: exon1 (CDS)

GCCCTCCCCC TCCCGCAAAA CAAGCCACCA CGAAATGTCC AAGAGACACA 
CTCAAATTTG GAGTGTGTGG GAGCTGGTTA GGTCTGGTTA GTGAGGTCAT 
CGGTACACCA CCGAGCCAGG AGTGTTGCTC GCTCATCAAA GGTTTGGCTG 
ACTTTGAAGC TGCCGTTTGT CTGTGCACTG CACTTAAAAC CAGCATTCTC 
GGAGTTGCTC CTGTCAAAAT TCCCGTTGCT CTCACTCTGC TTCTCAACTC 
TTGCGGCAAA AATGTTCCTC AGGGATTCGT CTGCTGATAT TATTATGTGT 
GCTCTGTCTC CCTTAATCAA AGAAAGAACG TTCCGAGACT CAGAGATAGT 
GCCTTGTATT ATTGTATTCG TTTATGCAAT ATTTTCAGAA AAAAGAGTTA 
TGTTTTGGTT CATTTGAATA ATACAGTCCT AAATCTTTGT CTTAAAATCA 
CGTAACCAAA TAATTGATGA ATGATAACCA GATCTATCGA ATCCATGATT 
CAGAGAACTT GTAACAAGTG AAGAAGAACT TAGGAAATGA GCTAAATTCT 
CCCAATGAGC CCCTGCTATT TCCATCTAAT TGATTTTATT GGGTTTTCTT 
TGACTGAAAA TGTGGTTATT GAACTGCACN ATGCNCANTG CATTGTTTGG 
CCGANTTNTA ATCACTAANA NACTTN

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 69764 [Map]; Strand: c
  - AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: 0; Region: exon1 (CDS)
  - AT4G00165.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 13-5617-1 - 3-prime edge
```
GGGAGGGCAT GGCTTGANGG TGGCTCCTGG TGTAACGTGG CCNAAGAAGA 
ATGTTATGTT AAGGAGCAGC AAGATGAGAA GAGATCGCAA AGCT
```

AT4G00165.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00165.2

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR