Home
Mutant Lines
13-5144-1

13-5144-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 8046669 [Map]; Strand: w
- AT1G22730.1 - [+] show detail - MA3 domain-containing protein
  Distance: 0; Region: intron2 (CDS)

CCTCAGGCCA ACATGGCAGA GGATTTAACA AAGAGTCGTA GACATTCACC 
TATAAAAGGT ATAGCTTTTT GTTTTTTACT TCCTCTGGAT ATTGTTTGTT 
TAACTTGTGT TATATGTGTT TAGAGTTTTT CTTTCTATTG CAGTGGAAGG 
GAGTGAAGAA ACTTGGGGAG TAGAAGATGA TGATGACCTT ACTGACCCTA 
TTTTTGATAC CATTGAGGTC TTATTTCATC ACTTTATATG TCTCTCTCTC 
TTTGATTTTA AAATTGGCTT CTTTTTTCTA TAGATTTGAG ATTAACTTCT 
CTTTTTTCAG GGCAATGGAC ATTCAGATCC AACAAGCTGC TTCGATACTG 
ATTTAAGTGA GTACAAAAAG AAGGCCACAG TAATCGTTGA GGAATACTTT 
GGCACCAATG ATGTTGTCTC TGTTGTTAAT GAACTAAAGG AGCTTGGAAT 
GGCTGANTAC CGTTATTATT TTGTCAAGAA GTTAGTCTCC ATGGCTATGG 
ATAGACATGA CAAAGAGAAA GAAATGGCTG CTTTTCTCCT CTCTACCCTT 
TATGCCGACG TCATTTGATC CCCCCAAAAA GTTTACAGAG GTTTCAACAA 
ACTGGTCNCT TNTGCTGATG ATTTATCTGT TGATATTCCC GATGCANNTG 
ATGNTCCTTG CTGNCTTGGG GNCNTNGGCC AATNGTNNAN ANCTTTNTTC 
CTNCN

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 8046553 [Map]; Strand: w
  - AT1G22720.1 - [+] show detail - Protein kinase superfamily protein
    Distance: -888; Region: promoter
  - AT1G22730.1 - [+] show detail - MA3 domain-containing protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 13-5144-1 - 3-prime edge
```
GCCTGAGGCA ATGGGTCGAG AGAAGAAGAA GAAATTTTCA ATTGAGAAAT 
GCAAAGGGGA TC
```

AT1G22720.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding (InterPro:IPR001881), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: wall associated kinase 4 (TAIR:AT1G21210.1); Has 17182 Blast hits to 16977 proteins in 349 species: Archae - 4; Bacteria - 9; Metazoa - 1405; Fungi - 31; Plants - 15495; Viruses - 26; Other Eukaryotes - 212 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G22730.1

Model type: Protein coding
Short Description: MA3 domain-containing protein
Computational Description: MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2); Has 2025 Blast hits to 776 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1297; Fungi - 8; Plants - 551; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink).
Link: InterPro Scan - TAIR