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Mutant Lines
13-5011-1

13-5011-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 3; Position: 22766001 [Map]; Strand: w
- AT3G61510.1 - [+] show detail - ACC synthase 1
  Distance: -271; Region: promoter

GGGAAAAACT AACAAAATCG GTTATACAGA TAACGGTCGG TACGGGATTT 
TGTAGTCTTT TTTTTTCTTC ATCTATGCCA ATTATAACAT TTTTTTTTTA 
CAACGGAACT GTTATATGGC CAAAAAAAAG TCTNATNAAT ATTNATGAGT 
NTCTATAATC AACAAANGAA CAAACNTTTA ATTACCAGCC NGGGCGTNNA 
CCACNCGNGC CCCTANAAAA ANAAAAACGG AACGGA

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 22746830 [Map]; Strand: w
  - AT3G61470.1 - [+] show detail - photosystem I light harvesting complex gene 2
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 13-5011-1 - 3-prime edge
```
TTCCCACAGA TTTNCCGAAN GAAANGGTAG NNGTCTTTTA CCGACCGTTA 
CCGACCGTTT TCATCCAACA TAGCCAACCT TCCGTTCTTG ATCTCCTTGG 
TCCTCAACTC CTTGAGCTTA GCCGGGCTAC CGGATC
```

AT3G61470.1

Model type: Protein coding
Short Description: photosystem I light harvesting complex gene 2
Curator Summary: Encodes a component of the light harvesting antenna complex of photosystem I.
Computational Description: photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G61510.1

Model type: Protein coding
Short Description: ACC synthase 1
Curator Summary: Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity.
Computational Description: ACC synthase 1 (ACS1); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 2 (TAIR:AT1G01480.1); Has 22999 Blast hits to 22998 proteins in 2818 species: Archae - 808; Bacteria - 15898; Metazoa - 560; Fungi - 631; Plants - 1241; Viruses - 0; Other Eukaryotes - 3861 (source: NCBI BLink).
Link: InterPro Scan - TAIR