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Mutant Lines
13-4667-1

13-4667-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 24787408 [Map]; Strand: w
- AT5G61680.1 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: 0; Region: exon2 (CDS)

GATATAAATA CCTTAAGGAT GATGTTAACA GCCATGAAAT AGTCGGACAA 
GACAATGAGA GTTGCGCTAT CGACTGTCCC ATATTGTGCT GCGGTACCGT 
CGAATGTCAA TACCGGCATT GCATTTGGAT GACCGTACAG TGTGATGAAT 
GGCTTGCTTC TATCTATCGT GACCTTCTCT TTGTATACAC CAGGACCTAT 
CTTGATGATC ACACGCCTAG TGTTCCCTGC CCGTACACTA TTTATCGCTT 
CGGTTATTGT CTTGAAATGG CCTCTTCCAT TTTGTTTCAC CTGCATTCGT 
AGATCCAAAA TATATTTTTA TGATGTGTAA AACCCAAAAT CCTACATACA 
AAATGCGATA TCATATAAAA TATCGCAATA TCGAACTAAA AAAAAATAGC 
GTGTTATATT TGTTGAAAAT TAACATAAGC AAAACGTCTA TTAAGTAATG 
TTTATAAATA CTATCATGCC TTGATGATGC GTGGCTTAGC CTCAGCGGTC 
AATANAGCTG GATCTAATGT GCTTTTTCTA CTAGCCAACG AAGGGACGTT 
GGTGTTGAAC CACTGCTCGA TTCGGCCTTT GTTCTCCGGA ATTGGTGCTG 
CATCGTTACC GAAAACCACG GGCGATGTAA TCACCACGAG CAGGATTGTT 
ACTATGAGGG ACACATAATT GNATCCCATT GGACTATTAA TATTTGGTAC 
TACTTTTCN

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24787344 [Map]; Strand: w
  - AT5G61680.1 - [+] show detail - Pectin lyase-like superfamily protein
    Distance: 0; Region: intron2 (CDS)
Flanking Genome Sequence: 13-4667-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
TGTTTATATC GTAAGATATG TCTCAAAATA TGTGGACTAA TCAAGGACAG 
TTTATGATTA CCTTACATGT GACATTACTT TTGAAAGAAA AAAGAAAAAA 
CGGCACTATT TTACAAATGA GATAAATAAA TTTTTGTTTT CAGAATT
```

AT5G61680.1

Model type: Protein coding
Short Description: Pectin lyase-like superfamily protein
Computational Description: Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G69940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR