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Mutant Lines
13-4392-1

13-4392-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 3155256 [Map]; Strand: w
  - AT1G09730.1 - [+] show detail - Cysteine proteinases superfamily protein
    Distance: -876; Region: promoter
  - AT1G09730.2 - [+] show detail - Cysteine proteinases superfamily protein
    Distance: -876; Region: promoter
  - AT1G09740.1 - [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 13-4392-1 - 5-prime edge
```
TTCATGAGCA AGTTGTGATG GTTTACTCTC AGGTGAATGT GAAAACACAA 
GTGGTTATTG GGGATC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 3155140 [Map]; Strand: w
- AT1G09730.1 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: -760; Region: promoter
- AT1G09730.2 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: -760; Region: promoter
- AT1G09740.1 - [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
  Distance: 0; Region: intron2 (CDS)

CTCATGAATG ACCACCCTCA AATCAATATA CACTTCTATA GATAACAGAT 
AAGTAATTGC TCCAGATTCT AATCCATCAG TGAAAGAGAA ATATTCTAAT 
CCATAAAACT TATAGAATTA CACTACTAGA TCTGGACTAT GAGGTAAAAT 
ATCCCATTCT CACAGGGGAC ACAAGGGAAA TAACTCTACT CACAGATTTT 
TCAGCACAAA TTTGACTAGC GTGTTCGAGG ATGGTGTCGG TGATCCGCTT 
CTGGTGTTGC TCGATTGCAG CAGTGAAAGC AGGAACCTCA AGACCACCTT 
AATCGCANAA TTCCCAGAGT CAAACACCAC ATGGTCGAGA TCATATATAC 
ATTAAACAAT CACAAAATTA GTAGTAACGA GACTCAACTG GGACCACCGA 
AAGGTATGGT GCCGGGACTC ACGCCGGCGG CTACAGAAGG CGACGGCTGG 
ACGTGGAGCA CGACGAATGA TGAATCGGAA GAAGACGAAG AGAGCTTGAG 
GTTGTCTAGA GCCCACCTCA GAGCTTCCAT ACTCACCTCG CTTCCATCTA 
CCGCCACAAC AACGCAATTC AAGCT

AT1G09730.1

Model type: Protein coding
Short Description: Cysteine proteinases superfamily protein
Computational Description: Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1); Has 1713 Blast hits to 1567 proteins in 224 species: Archae - 4; Bacteria - 15; Metazoa - 815; Fungi - 324; Plants - 268; Viruses - 7; Other Eukaryotes - 280 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G09730.2

Model type: Protein coding
Short Description: Cysteine proteinases superfamily protein
Computational Description: Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1).
Link: InterPro Scan - TAIR

AT1G09740.1

Model type: Protein coding
Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 5950 Blast hits to 5719 proteins in 1218 species: Archae - 487; Bacteria - 4382; Metazoa - 139; Fungi - 81; Plants - 701; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
Link: InterPro Scan - TAIR