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13-4333-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7512775 [Map]; Strand: c
      • AT1G21460.1 - [+] show detail - Nodulin MtN3 family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-4333-1 - 5-prime edge 
    CATTAGAGTA TAGCTCTGTT TCTTACTTCC TCTGTTTCTG CGTTTCTCTG 
    TTTTTTTCAG GTATGGACTT CCCTTTGTGT CAAAAGACAA CACACTTGTG 
    AGCACAATCA ATGGCACAGG AGCAGTGATC GAAACAGTCT ACGTGTTAAT 
    CTTTCTTTTC TACGCACCAA AGAAGGAGAA AATTAAGATC TTTGGTATCT 
    TCTCTTGCGT TTTGGCTGTA TTCGCAACAG TAGCTCTCGT CTCTCTCTTT 
    GCTCTTCAAG GAAACGGTAG AAAACTCTTT TGTGGTCTCG CAGCTACTGT 
    TTTCTCCATC ATCATGTACG CTTCTCCACT CTCCATCATG GTAAGCAAAC 
    TCAGGATTGG ATCTTTTTAA AGTTCTACTC TTTACTTTTG GATTCATTTT 
    GTTAAATTTT GTGTTTGGTT CATTGATTTA CAGAGATTGG TGGTAAAGAC 
    GAAGAGTGTA GAGTTTATGC CATTCTTTTT GTCACTCTTT GTCTTCCTCT 
    GTGGTACTTC GTGGTTCGTC TATGGTCTAA TCGGTCGTGA CCCTTTTGTT 
    GCAGTAAGTT ACAATTTCTC CTTCTTGTGT TGTTTTCTTT GGTAAATATC 
    AAAACTTTGT TTCTAACTTT GGGTTTTTGN TGTTGCGAAN ATCCCAAATG 
    GGTTTGGATG TGCATTAGGG ACACTGCAAT TGATACTATA CTTCATCTAC 
    TGGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7512891 [Map]; Strand: c
      • AT1G21460.1 - [+] show detail - Nodulin MtN3 family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-4333-1 - 3-prime edge 
    CTCTAATGGA AGATTAAAAA CGTAAAAGAG GGAATTTTGT TTACCAAGCA 
    GAGAGGAGAC AGTTGAGGAG AGTCATTGGA TAAGGGATAC CAGACAATNN 
    CTCAGNNNAT TCGTNCTNGA TGATTCTCTT GAATGTTATC CTAATTTCAT 
    TCACGAACAA AAAAGAATCT TGAGTTTTTT TTTTCCAAAC CANACCACCA 
    NNAANTCGAA NNANTCNTAA NTCGGTNCNC TNTAAAAAAN ANAAGNGATC 
    CNTCCAANGG ACCCAANAAA ANAANCANAC CANTNGCTTT TCCTGTAAAA 
    NGTAAAAAAC CNACAAAACC GGNTTANTAG TCCTCTCAGN GATTTCTCTT 
    GGAAAAAAGN CNAAAAANAT NGAAANNCCG AAAGANAGGT TGNGGAANTG 
    ATTTGCTNCC NAAACCCCCN AAAATAGNGN GANCNATGTN CNTNTTTTGA 
    TCTCAAAGGG GGCTAAANAT TCTTNTTTTT TTNTTGTNCG TAACCTGAAA 
    AAAAAAGNGA NAAANTNTNA CCTAANNGTT TTNTNTCGGC ANNCGTTTTT 
    TTNTCAAAAT TCACCGNGNG TTACCCNCTN CNNTGNGGAN CCCCNNTNTT 
    TCCAAANTTA NTAAANTTTN NTNNNTTTTG AAANAANGGN NTTAAATNTT 
    AAATTTTAAA AANNCCGGGN NCGGNNTNAA TTTTTGGNNN NNGAANAAAA 
    TTNGAAAAAA ANNTTTGGGT NAAAACN

AT1G21460.1

Model type
Protein coding
Short Description
Nodulin MtN3 family protein
Computational Description
Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Link
InterPro Scan - TAIR