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13-4300-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11649689 [Map]; Strand: c
      • AT4G21960.1 - [+] show detail - Peroxidase superfamily protein
        Distance: -1227; Region: intergenic
      • AT4G21970.1 - [+] show detail - Protein of unknown function, DUF584
        Distance: -3691; Region: intergenic
    Flanking Genome Sequence: 13-4300-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT TCAAAATGTA 
    CTCTAAACTA AATTCAATAT TTAACTTCAA CCCACAAACA GATAAAGTAT 
    AGGGAACACT CAAGAGTGAA GAGTGGTGAA CGTGTTTTAT TACATCACAT 
    GGATCAAGAT TCATTCAATA TTTGAGAAGA CTTTACGATA CGAATCTACN 
    TGACAATTAC TACAATAAGT AAAATAGTTG GATATATAAA TAACTACAGA 
    ACAAAAAGTA ATTGAATATG TACAAATGGA ATTATATCTT GAACTAAATA 
    ATCGAAATGT ACTTGAAAAA ATAAGAATCC ACCTTGAGTT CATCGAAAAG 
    AAAGATTCCA TAACCTAAAA GGAGCGGTTT ATCCGTTGTA TTAAAAATTT 
    AACAATAACA AATGTTTCAG GTAATTGCAA ATCGACCCAT GAATATATTT 
    TGACTTTAGC TATTCCACCC CATAAATATT ATTTGTTATA GCCGCCCCCT 
    TTGTGTGTAT TATTAACAAA AGAAGCATAA GTTTTTTTTG TAANATTCTT 
    TTTAGTCATA GGGGCCACTG ATGCCACTCA ATGAGACCAA AATCCAAAAC 
    TTAGTGATTG GTTTTTTGTT TGACAAAAAA ATGTGAATTG TTTAGTTAAC 
    CAAAATACTC TTCTAAATGA GGTAAACTAT CTAACAAGCC ATCCACATTA 
    ATATCTCCAA CCTAAACTTA TTTATTTTCT CATAGCACTG GGTAGGACTN 
    T

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11649784 [Map]; Strand: c
      • AT4G21960.1 - [+] show detail - Peroxidase superfamily protein
        Distance: -1322; Region: intergenic
      • AT4G21970.1 - [+] show detail - Protein of unknown function, DUF584
        Distance: -3596; Region: intergenic
    Flanking Genome Sequence: 13-4300-1 - 3-prime edge 
    GTTTTAACAT AAACGTTGTT TTGATATTTT TCACATAAAC TAAGAAGGTA 
    AATAGGTATA CTAATATGTC CCTGCAAAAT TAAGAAAAAT CTGAAATTAT 
    GTTATCTTTC ATATTCTTAA CTAATTTTCA TAGAGGTAAA CTAGATATCT 
    AATTAAAAGC TAAAGGCTCC ACTATTATTT GTTGCGGAAC TATTATGTTT 
    CTCGTTTCAG TAACAAAGGA CTAATTTTGT TTAGAATGAT TAAAACTAAA 
    TAAATATGTA ACAGAGCTAT AAAATGAGAG GACATTACTA CTAATTCGAT 
    TCTTCTTCTT TTCTTAATCC TAGAATTTTT TTTATTTTTT TTTTNCATCN 
    GGGGGAAGTN TNGGGNCTTT NNCCAAAATC NCNTNGAATN NGCAAATNCA 
    AATNCCCTTN AAATTNGGAT NTTGGGATTT NCCAATTTTT TTTTNAAANN 
    AANAAATTNN NTTTTTNNAN TNAAAAANNA ANNANCNGGN NCCCCCCCCC 
    NTTNNTTNCN TTNNCNAAGN GNCCCNAAAN NANTNTTGGG GGNCCNNNNA 
    GGNNGGNNNC NNNNNACCNN AGGGGCNCCN CGNGGGCTAA ACCCTAANNC 
    CTGTTTACCA GGTTNTANCN AAAANTGGCC GGNNAACATG TAAANCTGGG 
    GGNTNCTNGG GGAAAAAACC NGGTNAANNC CCNNNGNTAG AAAACNAAAC 
    A

AT4G21960.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Curator Summary
Encodes AT4g21960 (AT4g21960/T8O5_170).
Computational Description
PRXR1; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G37130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G21970.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF584
Computational Description
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G04630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR