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13-3667-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 280506 [Map]; Strand: w
      • AT4G00680.1 - [+] show detail - actin depolymerizing factor 8
        Distance: 0; Region: intron1 (CDS)
      • AT4G00690.1 - [+] show detail - UB-like protease 1B
        Distance: -807; Region: promoter
    Flanking Genome Sequence: 13-3667-1 - 3-prime edge 
    GATTCTGTTT ATGTTCTGAT TGTCAACATG TGAAATTTAT ATGTGGATGG 
    TGTGGTTGAA TATATATGGT TTTGTGTTAT TTGGTTTGGA AGTGTAACAC 
    ATGAATAGGT TTCATGTATA TATTGACTTC ATTAAGAATG ATGTTGTGGA 
    CATATGGTTT ATATGCTATG ATCCTAAATC ACAATCTAAG TTTTATGGTA 
    ACCTGGTTAG GAAGATGTAT AGAATGGAAA AAGCT

AT4G00680.1

Model type
Protein coding
Short Description
actin depolymerizing factor 8
Computational Description
actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00690.1

Model type
Protein coding
Short Description
UB-like protease 1B
Computational Description
UB-like protease 1B (ULP1B); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G15880.1); Has 1373 Blast hits to 1372 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 603; Fungi - 267; Plants - 349; Viruses - 5; Other Eukaryotes - 149 (source: NCBI BLink).
Link
InterPro Scan - TAIR