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13-3642-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24797732 [Map]; Strand: w
      • AT5G61700.1 - [+] show detail - ABC2 homolog 16
        Distance: 0; Region: exon16 (CDS)
    Flanking Genome Sequence: 13-3642-1 - 5-prime edge
    CTGGATCATA TGTCTTCACA ATGACAACAT CTTCAAAACA TGAGGAAGAG 
    GTAGAGAGAT TGGTTGAATC TGTCTCTCCC AACGCCAAGA AGATATATCA
    CCTTGCTGGT ACTCAGAAAT TTGAGCTCCC AAAGCAAGAG GTTCGAATTG
    CTGAGGTGTT TCGCGCTGTT GAAAAGGCCA AAGCCAACTT CACAGTCTTT
    GCATGGGGGC TCGCCGACAC AACGCTCGAA GATGTCTTCA TCAAAGTCGC
    TAGAACTGCT CAAGCCTTCA TTTCTTTGTC TTAAAAGCTA CTTTTTACAG
    TTACAGGGTT CTCTTTCTTG GGTCAAAATT CTATGTCTTG AAACACACGC
    AAACTTACCA CCATCTTGTT AATAGCTCTT TAGTGTCGA
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24797616 [Map]; Strand: w
      • AT5G61700.1 - [+] show detail - ABC2 homolog 16
        Distance: 0; Region: exon16 (CDS)
    Flanking Genome Sequence: 13-3642-1 - 3-prime edge
    TGATCCACCG TACCTGCTCT TCAGTTCCTT GGAGTTTCCT ATGCATTGCA 
    AGCCTCCGTC GA

AT5G61700.1

Model type
Protein coding
Short Description
ABC2 homolog 16
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 16 (ATH16); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 14 (TAIR:AT5G61740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR