1. Home
  2. Mutant Lines
  3. 13-3636-1

13-3636-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4979397 [Map]; Strand: c
      • AT5G15320.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 503; Region: intergenic
      • AT5G15330.1 - [+] show detail - SPX domain gene 4
        Distance: -1091; Region: intergenic
    Flanking Genome Sequence: 13-3636-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATTCGCACAA TGAGCGCGTC GATTTCGGCT TCAGTTTTGG ACTTTTTGTG 
    TTGAAGACTT TGAGCACTTA AAGGCTGACA TTATTCAGGC TCTTGATAGT 
    ACCATATGAA GAAGTTGTCA ACGTCCCGTT TGAGCTAAAG CAGTAGTTAA 
    AGTCGTTCCT CACCTTTTCA TTCCCTTCTT TTTTCTTCTT CCTACTATTA 
    AAAACGAAAC TACAGATGCC TAAATGTTGG AGGCATGAAT AAATATGTTT 
    AAATATATAA AAACAAACCC TGGTCACACA CTTTAGCCAA TAAGAATTTA 
    GAGTCGTGAC TATAACATCA ACATTTAATT GTATAGTTTT TAGTGATAAG 
    TACTGTTTAA AGTGATATAG TATATGAATA TAAGTGGATT TAATTCTGGA 
    TC

AT5G15320.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G15330.1

Model type
Protein coding
Short Description
SPX domain gene 4
Computational Description
SPX domain gene 4 (SPX4); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR