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13-3408-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3626120 [Map]; Strand: w
      • AT1G10880.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-3408-1 - 5-prime edge 
    AAGACGGCGT AGTACCGGCG ATCAGAGACG ATCTCGGCGG CGACTCTACG 
    TGAGATTTCG AACCATTGGT TTCCTTTCCG CCAGTCAGAG AGCGACACGT 
    GTGGGAGCAT TTTAGGGGTG TAACNGGCCT CGGCCCATGG GCCTTGGGTC 
    GTCGAATGAG CCGAGGAAAG AGCGAGTGGA GCGCGTGAGG TAAGTGTAGA 
    TTGTGGTGAA GTTGAAGAGA GGGATACAAG TCTCGGAGAG GAGGACGAAG 
    CGTGCGTTGG AAGGTTCTAG TAGGGCATGA GATATAAGAC GCTTCTCTGC 
    ATCCATCATC GAACATTTTC CCCATTCAAC GGCCTACAAT ATTTTACAAA 
    TGTCAAAGTA TCGCAATGTT ATCTTGTAAA ATACAATAAT ATGTTAACCA 
    ACAAGGCAAC AAATTAAACC TAATTAATGA ATGTAAAATA TATAATCATA 
    TACCTTGCTT GGTATCCGTT TCTTGTAAAA TACTGAAGAT TCCGGCGGCT 
    CTTGAGTGAA CTCCGGCGAG GTATGAACGT AGATGGAATA AAACCCTTCA 
    TGACCTTTGA AGAACATTTC CCAAAGAGGG GACAACGGCA AATTCCACCT 
    CGTTAGAAAC ATGAACGCAA CCTTTGGATG GGTCTCATTC TTCATGGGGC 
    TGCGTGGGGC CATCGCTGCT CGCCACATCA GCTCTTCGTC TGCCATATTA 
    CTACCAGAGC TG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3626004 [Map]; Strand: w
      • AT1G10880.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-3408-1 - 3-prime edge 
    GCCGTCTTTA AGGATCACTG CCGACCGCCG TGTTATATCG ACGAGCATTA 
    TCTTCCGACG TTAGTTAACA AGATTTGTCC GGAGATGAAT T

AT1G10880.1

Model type
Protein coding
Short Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Curator Summary
Putative role in response to salt stress. Mutants grow larger than the wild type under salt stress condition (Ann Stapleton and Ashley Green, 2009, personal communication).
Computational Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G16170.1); Has 696 Blast hits to 692 proteins in 56 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 7; Plants - 576; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Link
InterPro Scan - TAIR