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13-3105-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3627610 [Map]; Strand: w
      • AT1G10880.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: -528; Region: promoter
      • AT1G10890.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -116; Region: promoter
    Flanking Genome Sequence: 13-3105-1 - 3-prime edge 
    AAGAAGATGA AGCCAGCTTT TGTAAATTAT TGGAATTGGT CTTGTTCGTT 
    ATGAACATTG AAAGCCTTTT GGGCTTATTA AACATTGAAG CCTTTTGGGC 
    TTATTAAATT CGACATGGGT TTTGAGCCCT TCCAAGTTTT TAAGTTTTGT 
    TAAGGTTAAA GAAAAAACAG TTAACATTTT AACCTTTTTA GCATACCCAT 
    AATTTTACAT AGCCGCAAAT TCCATGCTCT TCTTCTCTTC TTTTTCACTT 
    GACTAAATCA CGTTTCACTA AACCCACAAT TCCCATGCAC ATTTCTTCTC 
    ACACCATGCA CGTCCATCAT GTATACACAT CACAATTCAC ACATCATGCC 
    TAGGTTTACT AATCCTGAGT ATATGGATCA ATTACATGAT CCTATTTTTC 
    TATTAATTAT TATAAGTATA TATTAAAGAA TCAACATAAT TGATTGTGAA 
    CTTTCGATTC CTTTATAGGC TTATTTTGTG GCCAAAACGG TAATCTCATT 
    CTACAATATA CTTTAGCACC ACTNTGGAGA CGCTTTCTTA ATATGCACTN 
    TAAATGCATA CNCTTATTNC ACACGAAAAT AGGACNTNGN ACNANGCAAG 
    CCAAAGAGCG GAGGACTAAA NTCAATNNAC CCAANAAAGG AAAATGAATA 
    ACCACAAGAT TACAACCTTT GCCGTAAAAA CTTACNTTNC GGATGGANGT 
    ACNAGTNCCG GGCNGNNNAC CANNCTTCCC NNNNNTTNAN TTCTN

AT1G10880.1

Model type
Protein coding
Short Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Curator Summary
Putative role in response to salt stress. Mutants grow larger than the wild type under salt stress condition (Ann Stapleton and Ashley Green, 2009, personal communication).
Computational Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G16170.1); Has 696 Blast hits to 692 proteins in 56 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 7; Plants - 576; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10890.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petal, flower, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13340.1); Has 11769 Blast hits to 8435 proteins in 698 species: Archae - 22; Bacteria - 971; Metazoa - 5937; Fungi - 1065; Plants - 592; Viruses - 101; Other Eukaryotes - 3081 (source: NCBI BLink).
Link
InterPro Scan - TAIR