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13-2906-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3627575 [Map]; Strand: c
      • AT1G10880.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: -493; Region: promoter
      • AT1G10890.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -151; Region: promoter
    Flanking Genome Sequence: 13-2906-1 - 5-prime edge 
    CTTTTGTAAA TTATNGGAAT TGGTCTTGTT CGTTATGAAC ATTGAAAGCC 
    TTTTGGGCTT ATTAAACATT GAAGCCTTTT GGGCTTATTA AATTCGACAT 
    GGGTTTTGAG CCCTTCCAAG TTTTTAAGTT TTGTTAAGGT TAAAGAAAAA 
    ACAGTTAACA TTTTAACCTT TTTAGCATAC CCATAATTTT ACATAGCCGC 
    AAATTCCATG CTCTTCTTCT CTTCTTTTTC ACTTGACTAA ATCACGTTTC 
    ACTAAACCCA CAATTCCCAT GCACATTTCT TCTCACACCA TGCACGTCCA 
    TCATGTATAC ACATCACAAT TCACACATCA TGCCTAGGTT TACTAATCCT 
    GAGTATATGG ATCAATTACA TGATCCTATT TTTCTATTAA TTATTATAAG 
    TATATATTAA AGAATCAACA TAATTGATTG TGAACTTTCG ATTCCTTTAT 
    AGGCTTATTT TGTGGCCAAA ACGGTAATCT CATTCTACAA TATACTTTAG 
    CACCACTTTG GAGACGCTTT CTTAATATGC ACTATAAATG CATACACTTA 
    TTCACACACA AAATAGGACT TCAACGACGC AAGCCAAAGA ACGTAGACTA 
    AAATCAATAG ACACAAGAAA GGGAAAATGA AGAAGCAAAA GATTACAACC 
    TTTGTTAAAG AACTCAACTT ACGGATGAAT T

AT1G10880.1

Model type
Protein coding
Short Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Curator Summary
Putative role in response to salt stress. Mutants grow larger than the wild type under salt stress condition (Ann Stapleton and Ashley Green, 2009, personal communication).
Computational Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G16170.1); Has 696 Blast hits to 692 proteins in 56 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 7; Plants - 576; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10890.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petal, flower, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13340.1); Has 11769 Blast hits to 8435 proteins in 698 species: Archae - 22; Bacteria - 971; Metazoa - 5937; Fungi - 1065; Plants - 592; Viruses - 101; Other Eukaryotes - 3081 (source: NCBI BLink).
Link
InterPro Scan - TAIR