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13-2456-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 289276 [Map]; Strand: c
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon2 (CDS)
      • AT4G00710.1 - [+] show detail - BR-signaling kinase 3
        Distance: -772; Region: promoter
    Flanking Genome Sequence: 13-2456-1 - 5-prime edge 
    GCTGGAAGTC GCCGGAAAAA GTTGACGGGA GCGGAGGGAA TGCGGTGTCG 
    GAGCTTTGGA TGTCGCATGA AGTAGTAGCC GGATAAGAGA GCGACAAGTT 
    TAAAAGGGGT AATGTAGAGA GCCATGGCAA TAATGAAACA GAACGTCACG 
    AATATTGCGG TGGCGCGTGG ATCACGCCAG CTCAGCAACG CTTGCACTCG 
    CTCTCCTTGT GCGGCTATGT CTCCAGCCAC CGACTGTACC TTCCCGGCCA 
    CAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 289392 [Map]; Strand: c
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon2 (3UTR)
      • AT4G00710.1 - [+] show detail - BR-signaling kinase 3
        Distance: -656; Region: promoter
    Flanking Genome Sequence: 13-2456-1 - 3-prime edge 
    CTTCCAGCCA TGACCGACTC TATGCTGTGA ATCTTCTTCT GGATAGAGTA 
    ATCAACAAAC ATGCCATGTA TATAACTCTC TTCTTTGAAT CTGTATCTAT 
    CTATCGATAT GCATCTATAT GTGTTGACAA TCATGCNGTT CGTGAACTCG 
    TTCTCCGAAT TAACAATGGT GATCGCAAAC AAACTCTGAT GATCAAATCA 
    AATAAATTGC TTCCACACTC GCAATGTTGA AACAGAGAAT CTAAAAGCTC 
    AAAACAGAGT CGGTTAGATC CTAACAAACT CTTTAAACCA TCTCCAATTC 
    GCAACCAAAG CTAAACCATC GCTTCCACAA AACTAATTGG TCGATAACCA 
    GCCTAAACCC GGTTTGATTT AAGCTGAACC AGATCCGTGT GATCAATATA 
    TAAAAAAGCC CATGGGCCTT GAACAAAACA ACGTCACATC GGTGATTAAC 
    ACTGTTTTTA GTGCTTAATT AGTTCCCTCC CTGATTACAA AAGTCCGTTA 
    GTGATTACGG CATGAAGAGA CAACGGGAAA GAGGAAGAAG CATATCTCTC 
    TCTCTGTCTT GTTCTATGAA CGAGACCACT TGCTTTAACA GGCGGTGCTA 
    ATTATTTTCC AGAAAATAAA AAACCCCAAA AATCTGTACG ACAAACAATT 
    TATTAATCAA CTCTTTTTTT TTCTTTCTAT AAGGGTAATG GCCANATTCT 
    TTCTTNTCTC ACCCCATTAA AATATTTCAT CAACTTGN

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00710.1

Model type
Protein coding
Short Description
BR-signaling kinase 3
Curator Summary
Encodes BR-signaling kinase 3 (BSK3), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.
Computational Description
BR-signaling kinase 3 (BSK3); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT1G01740.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR