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13-2099-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2870059 [Map]; Strand: w
      • AT1G08920.1 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: 0; Region: exon16 (CDS)
      • AT1G08920.2 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: 0; Region: exon16 (CDS)
      • AT1G08920.3 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: 0; Region: exon16 (CDS)
    Flanking Genome Sequence: 13-2099-1 - 5-prime edge
    TTTANAAACT AACAAAATCG GTTATACTGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC CTTAGCCAAC TGGTCCTTTG GTTGGATTGT
    TGCTTTCGCC TACAACTTCA TGCTAGAGTG GAACGCATCA GGTATAAATA
    CATACTACTA TATAATATAC TATAGAGTCA TTAAACTCTC AAAAAAAAAT
    TANATCTTTA ATCTGATTTA ATTTTTGAAA TATATTAATC TGTTTCAGGA
    ACGTTCTTGA TCTTCTTTAC TATATGTGGN GCGGGTATAG TCTTTATTTA
    CGCGATGGTA CCCGAAACTA AAGGAAGAAC ATTGGAAGAT ATACAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2870061 [Map]; Strand: w
      • AT1G08920.1 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: 0; Region: exon16 (CDS)
      • AT1G08920.2 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: 0; Region: exon16 (CDS)
      • AT1G08920.3 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: 0; Region: exon16 (CDS)
    Flanking Genome Sequence: 13-2099-1 - 3-prime edge
    TTTANANNGN TAGAGGTATT TTATTGACCG TTACCGACCG TTTTCATCCC 
    GTATAGGTAA CCAGAGTCCC ANCAGAAACT TTAACATTCA TTGGGAATAT
    CTGCAAAATA AAAAATGTAA CATTTTTTAG AGCTGGAAAA AATATATATA
    TGTCCGGTTT TTGAGGAGTT AATGTTAATG TTCATGTTTG TTTACCTCAC
    ACATGATGAT CCATGGTAAG CCTCCCATGC CTNCGGCAAA TGAAGAGATG
    AAACCCTGTA ATATGATGTC AAATTCAGAT CAAGTTATAC AAGAGCTATA
    CTCTAAGTTG CTTGTTTATT ATGTCTAAGA AATGACTTTT AAACGTACCA
    CTACACCGAT ACATGTGAAA ATNGGAGTGA GCTCATCAAG CATGCCNTAT
    GACTGTCCAA GAACAAAANT AGAANAAATT TTAGTATAAC TGGTAAGAAN
    TCCTCCANTA ANCANCAGNN ANAAAAAGTT TGTNTATATC TTTTGGGTTN
    GAAAGCGAAT NCGGTTTANT GTTNATTCCC CGAATGCNGA AAGGAAAAAC
    TGAGGAGCCA CGCTGNAAAG CANNTTCCAN CNGTANAGGC CNGTTNTAAA
    NAATCATTTC CNCNGTTTGA ANGATATTNT GCCTAAACTT TGGTGCNTCN
    TGTCGTGNTT TNACCNAANN NCCAGANNNC GTNATCCTTA NCCNATNCAG
    GGGNNTTCNA CCNTTTTNTN CCCCNANTTN AGANCNNGTG ANNTTTNGGN
    NTTTNCAAAN CCGAACCCAG GAANTNNAAG NNACATTNCT GNNAANTTTT
    CAACAAAANN AAAAN

AT1G08920.1

Model type
Protein coding
Short Description
ERD (early response to dehydration) six-like 1
Curator Summary
Encodes ESL1, a transporter for monosaccharides.
Computational Description
ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 23660 Blast hits to 23155 proteins in 1879 species: Archae - 378; Bacteria - 9422; Metazoa - 4252; Fungi - 6142; Plants - 2335; Viruses - 0; Other Eukaryotes - 1131 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08920.2

Model type
Protein coding
Short Description
ERD (early response to dehydration) six-like 1
Curator Summary
Encodes ESL1, a transporter for monosaccharides.
Computational Description
ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 22673 Blast hits to 22189 proteins in 1824 species: Archae - 355; Bacteria - 8744; Metazoa - 4150; Fungi - 6023; Plants - 2283; Viruses - 0; Other Eukaryotes - 1118 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08920.3

Model type
Protein coding
Short Description
ERD (early response to dehydration) six-like 1
Curator Summary
Encodes ESL1, a transporter for monosaccharides.
Computational Description
ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR