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13-2061-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2865288 [Map]; Strand: c
      • AT3G09330.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 13-2061-1 - 5-prime edge
    ATAAACTAAC AAAATCGGTT ATNCTGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCTTTT CCCATTCTTC GGTAAAAATA CCCTAACTAG
    CTTCTTTTTG CATGAAATTA ATACAAATAA AACCCCATTT TTATCATCAT
    TTGTTCTTAA TCTTTGCAGC GATCATGGGG GCNTTTGGTG GGATCATTCC
    TCGCAATGCN TTGTTGTAAG TCAACGTTAA CAAAATTCCA GCTATTATCA
    ATTATTAGGC ATATCACATA TGTAAAAAAG GATTCATATA TATTTTGTTT
    ATCGTGCAGG CTTTTATCTT TCCTTGTCTT TGTTATCTGA GTATCTTGAA
    GGGTAGATTG AGTAAGACGC AAGTAAGAGA TATATTAATT TATTTTATTT
    TATGCCATAA AGTAAAGTGG TTATTGTTCG ATTCAGTATT TGATTTTCCC
    ATAATTTCAT TTATAATTTT TTGTAAACTA TTTGATATTT TGGCAGATTG
    GAATATGCGT TTTCATCATA ATCTCTGGCA TTGTAAGCGG TTGCTGCGGG
    ACGTACTCCG CCATTGGAAG ATTAGTAGGA AAACTGGATT GATGGTAGAA
    TAGTGAACAA TGAAACAACA TAGAATTGTG AAACAATAAG AGATTTTCTT
    TAATAAAAGT TCTATCAAAT ACGTAATCAA GTTTTGTGAA ACTTTAAACA
    CTAATTTTAG TACAGTTTTA CAGTTTATTA ACTTGCAATC TTCTTTTTTT
    TATTAAATGA ATTTATATAT GAGCCACTAA AAATGCTCAT TAAGANATAT
    CATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2867338 [Map]; Strand: c
      • AT3G09330.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: -108; Region: promoter
    Flanking Genome Sequence: 13-2061-1 - 3-prime edge
    GAAAACGGTA GAGGTATTTT ACNGACCGTT ACCGACCGTT TTCATCCTAC 
    TCACGTCGAG TTTGTATTAA TCCAATTGAT ACATGATCAT AAACAAATTA
    ATATTCTGGT TTTTACCAAA AAAAAAATAT ATTCTGGNCG NGATNTTTAG
    NGNGGAAGTA NCNGTTCACA TGTNCCAAAG TCAAAGGTNT NTGCCTTGGA
    AATTTGGAAT GGATTTGATT TGNCAAAAAT AAATTTTAAA AANANAAATN
    GCCNTAAATN TGCTNTGAAT CAATAATTAA GTNTTTATGC NTGAAANCTT
    ATTNTTTAGG NGGGTAANAA ANANAGTAAT GTTTTGACNT TTTTNCCCTT
    NTCNTANANA AGGAANAAGT TCANCGTTCN TCNTANCTAA TAAGTTANCG
    GGGATAAACA AATNCNCNTG ATAAATAAAT AAATTAANGC TTAAATTAAC
    NTGTTNCAAN AATAAANTAA TGGGTAGTCT TTTAGTNANC CGANNGTTTA
    AANNGATAAA AATTTAANNC ANTNGGNTCN GTATACNACN NCCTNTNTNN
    NGGANCCTAC NCTTCCCCCC TTTNAAAANN ANCTTCGGGA CNATNACCNN
    ANGNGNCCGG NGGGTTNGCN AANCANNTTT ANTTAAATNN CCNANTTANN
    CGGNCCTTGN TTTTNNTGTN TNCCNTTTNT TNTTNCCAAN NGGATTTNCC
    CCCGGGAANC NTTTTTTNCC CCNNAANANN AAAAANGGNT CCNCNTTNNC
    NTNCGTTTTN TTAAANGCAN TTTTTANCAT NCGCAANTAN NNAATNGCCC
    NATTTNNTNN NNTTCCNNCA AANCC

AT3G09330.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G09340.1); Has 5089 Blast hits to 5044 proteins in 316 species: Archae - 6; Bacteria - 118; Metazoa - 1819; Fungi - 983; Plants - 1434; Viruses - 7; Other Eukaryotes - 722 (source: NCBI BLink).
Link
InterPro Scan - TAIR