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13-1876-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1497556 [Map]; Strand: c
      • AT1G05170.2 - [+] show detail - Galactosyltransferase family protein
        Distance: -3308; Region: intergenic
      • AT1G05180.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 558; Region: intergenic
    Flanking Genome Sequence: 13-1876-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGANNGT GGGTTATTAT 
    NNATTTGNCN GNTGCGTNCG ACATNNCCAG TTNACAAGAC TATATTACCT 
    CTCATGTGTT TATACATTAT ATATATTTAT ATACTACAGN ACATATTTAA 
    ACAAATGCAT AAGAAAAAGG GTATAATTGA TACTTNTATA TCGAAAACGA 
    AATGTCATGG TAGTAACAAG TGAAACCCAC CGAGCTTCAA TGGCCTCTAT 
    TATTCATGCA TTTGCCATAA TAACCCTACA CCACCCAATT CAAATTGTCT 
    TTATTGCCCC AAATCCCTAA ATTGGATTTG TGGTTCTTGA TGTTATTAAT 
    TCTTTGATGC CCATTAACTT TTTAGACAAT TTTAATATTA TATTTTGATT 
    GATCTTATTC TTGGACCCCA TTTTATTGAG AGTAACTTTT GAGCTTTGAT 
    GTTAACGTAA TGCAAATTCT TGTCGTTTGT ATGATTTGCA AAAATCATCT 
    NATTAAACCT TTTGCCGACT AAGAATCATG TGGAGAATGG GCTTACTGTG 
    TCCCTTTTTA TGAGAGAGAC TCATGGAGAA TGAGCTAACT GGGGCCCATT 
    TTATGTGACT CCCGTGGANA NTGGGCTTAC AGNGGCCCAT TTTTATGANA 
    TNANGCTNCC TTTNACCCTT CAAANCTTTC TAACCTNGAG GNCAAAAGCN 
    AACNAGAATT TTCANANAAT GNTGNGNCCG GATGGGCTNA CTGACCTGTC 
    NNTTNGAAAN NTTTGTTCTA NANNNACACA

AT1G05170.2

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05180.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary
Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.
Computational Description
AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 6539 Blast hits to 5902 proteins in 1375 species: Archae - 158; Bacteria - 2625; Metazoa - 1326; Fungi - 867; Plants - 442; Viruses - 0; Other Eukaryotes - 1121 (source: NCBI BLink).
Link
InterPro Scan - TAIR