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Mutant Lines
13-1739-1

13-1739-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 4010432 [Map]; Strand: w
- AT1G11880.1 - [+] show detail - transferases, transferring hexosyl groups
  Distance: 0; Region: exon1 (5UTR)
- AT1G11890.1 - [+] show detail - Synaptobrevin family protein
  Distance: -347; Region: promoter

GACAGATGGT TCTCGATTGC AAGAGTCCGG TGACGATTTG TGATTTTCGA 
TCTTCTCGTC GGAGAAGAAT GTGTTACTCT CTAAATGTAA AAGAGAGTTT 
CAATTTAATA AATGAACCGG TCGGTTCAAT CAAAAGGGAA AGTCCCGGTT 
TTAGAAAATT GTTCCGGTTT TATCCGGGTC ATTAAGACGC TTTGATCGGT 
TCAATCCAGT TTTAAAAACG CTAAGATGAA TGTAGCGTTT GTGAAGCTAA 
TTAAACGAGC CACGTCATCA AGACATGTCA ACAAAACGCG TCACAAGCCC 
AATCACGTGA GGGCTGGTAA TTGGTAATCG CAAAACGTAG ATCGCCATAA 
ATTAAATTTC GAACAGACAA AAAAAGAAAA GAAAATCAAT AAATAATCAT 
TTAGTCCCTT TGTTTGATAA ACCCTTTAAT TGAAAAAAAA AACAAATNAC 
TTNTNTTTCC TTCAATNATC GNCTTCCTNN GGTTCTCANA TCTTTCAATC 
GACCANAAGC AATTTTAAAG CTCGTTTCAG GTTTGTCTAA ATCCATGCTC 
AAGTCTAATT TTACGTTTTA CATCTGNGGA AAAATGGANA ATTTTGTNCA 
ATTTTGTATG AAATTTGCTT CCCGTTTGGG ATCGGAACCT TTNAAAANGT 
TTTGAAAATA TTACCCTTAC TGGGGNAGCC NTTGGATCAA TTTTNCCGNN 
GGACCNCTNG TTTGGNGG

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 4010316 [Map]; Strand: w
  - AT1G11880.1 - [+] show detail - transferases, transferring hexosyl groups
    Distance: 0; Region: exon1 (CDS)
  - AT1G11890.1 - [+] show detail - Synaptobrevin family protein
    Distance: -463; Region: promoter
Flanking Genome Sequence: 13-1739-1 - 3-prime edge
```
CATCTGTCGC CTTTTTATAC TCGAATACGA GCTCGTGATC AATGGCGAAA 
GCT
```

AT1G11880.1

Model type: Protein coding
Short Description: transferases, transferring hexosyl groups
Computational Description: transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11890.1

Model type: Protein coding
Short Description: Synaptobrevin family protein
Curator Summary: member of SEC22 Gene Family
Computational Description: SECRETION 22 (SEC22); FUNCTIONS IN: transporter activity; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G52270.1); Has 1577 Blast hits to 1577 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 548; Fungi - 342; Plants - 449; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink).
Link: InterPro Scan - TAIR