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13-1603-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 101145 [Map]; Strand: w
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
      • AT2G01160.1 - [+] show detail - pre-tRNA
        Distance: -920; Region: promoter
    Flanking Genome Sequence: 13-1603-1 - 5-prime edge 
    TCAGGGACAT GGCAGTGATG CGTCGATCTC AGCCTTCCCT CTTCGCTCTA 
    CCTCTACTGC ATCATCTCAT TGATTTTTAT GTGAAGAAAG AAGAAAGCAA 
    GAGAGAAGAA GATGGAGGGA GGATGCNTTT TTTATTTATC TTCCTTCTCC 
    TCTTTCCTTT TTAGGAGAAG ATTCTTATTT CTTACTACAG AAGATTGATT 
    CTTCTTATAT ATCTATATAT ATATAACCTT CTATATTTAG CTATGTTTTT 
    GAGGAATCTC AGATCGGAAG AGAGGTCCTT TTGTTTTTCA GATTTCCACT 
    CTGTAAATTC TTAGTATGAA AAGAATCAAA TTAAGCT

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01160.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Asn (anticodon: GTT)
Link
InterPro Scan - TAIR