1. Home
  2. Mutant Lines
  3. 13-1417-1

13-1417-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2861307 [Map]; Strand: c
      • AT1G08910.1 - [+] show detail - zinc ion binding;zinc ion binding
        Distance: 137; Region: intergenic
      • AT1G08920.1 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: -5952; Region: intergenic
    Flanking Genome Sequence: 13-1417-1 - 3-prime edge 
    TATGTGAGTC AGTCGAACAC ATGTACTACA AAGTTGATTT TGATTTGTGT 
    ACCGATCAAT ATATCGGATC AGTACAATAG TAAGAATTAC TCAACCAAAT 
    TAAAAACCTA AACCTAACTT AATAGAGTTG ATCCAAGTCG TGCATCGGTA 
    GGTACGCNTG CTCATCATAC TAAACACGTG AACTACTGAA ATAAAAAATA 
    ATAAACTCAT TTATTAGTTT TCTTTTAGAA CATCAAAGCT CATTCTTTTT 
    ACTAGTATTT TTATAAGCTA GGGAAATTAT TGAAGGAATA TTAATATACC 
    GACAAGAGAA CAGGATATGA ATGCATAGGT CAATCATTAA AGTCATCGTC 
    ATTTCCAAAT GAAACCATTC GCAAACGCTA ATGCAAGAAT GTTGCTAGCC 
    TAGGGTATGG AGAGAGTTAT GTTTGGTATG CAAGTAATAA AGAAAGCAAT 
    ATCAAGACAA ATTCAAATGC GAAGAGTCTT CTTCTAGTTC CCGCGATTAG 
    TTAGGTTGAT TCTCCTATAC GTCAACGTTT TCTTGATCAA TCGATTTTAT 
    GGATGACTTT AAGGATCATA CAAAATCCTT TTATATCGGA ACGAACGATA 
    GGCCACACAA CTCCCCCGAT CAACATGATA ACTTTGTCTA CAGACAAGAT 
    AAAAAGAAAG CTAGAATATG CCCATATCAG GGGTCCTAGT CCTTATCCTG 
    ACATTAATGA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2861192 [Map]; Strand: c
      • AT1G08910.1 - [+] show detail - zinc ion binding;zinc ion binding
        Distance: 22; Region: intergenic
      • AT1G08920.1 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: -6067; Region: intergenic
    Flanking Genome Sequence: 13-1417-1 - 5-prime edge 
    CGTCACATAT CAGAAAAATG ATAAATGTCA TTGTAGACAA TGAAGCAATA 
    CTAATGTAGT GTATTGTGGT TGCGGCTTCG TTATGCAGTT TTTTCTTCAA 
    GTTTTGTTAT TTCGTGAAAA TCAACAACTT TTCTCATTCT TCCGCATAA

AT1G08910.1

Model type
Protein coding
Short Description
zinc ion binding;zinc ion binding
Computational Description
embryo defective 3001 (EMB3001); FUNCTIONS IN: zinc ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, MIZ-type (InterPro:IPR004181); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 1002 Blast hits to 979 proteins in 199 species: Archae - 0; Bacteria - 25; Metazoa - 593; Fungi - 182; Plants - 101; Viruses - 6; Other Eukaryotes - 95 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08920.1

Model type
Protein coding
Short Description
ERD (early response to dehydration) six-like 1
Curator Summary
Encodes ESL1, a transporter for monosaccharides.
Computational Description
ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 23660 Blast hits to 23155 proteins in 1879 species: Archae - 378; Bacteria - 9422; Metazoa - 4252; Fungi - 6142; Plants - 2335; Viruses - 0; Other Eukaryotes - 1131 (source: NCBI BLink).
Link
InterPro Scan - TAIR