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13-1241-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58893 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-1241-1 - 5-prime edge 
    AACCCAATGG CTCCGCATTG CTCATCGGTG GTGGCGTCGC CGCCGCCTCC 
    GACGGCGCTG TTTCCGCCGT GAGAGGAAGA CACCGTGGAG GAAGAGGTTG 
    GGCCTTATGA GGGAGTCCAG AACAGAGGTA GGCTCCGCCG CGGGAACTTC 
    TTCCTCTTCT TCTTCGCCGC CTCTTGCTTT GCGGTGGCTC AAAAGCGGAG 
    ACGACGGTGG TTGGGGGAAG GAAGACGAGA AAGAAGAGAA ACAAGAAATC 
    CCCTTCCCTT GAAACTCTTC AAAGGGTAAG GGCATTGCAG ACGATAAAAA 
    ATAGTGTATT TGTCTTCTTG AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58777 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-1241-1 - 3-prime edge 
    ATTGGGTTGG GTGATTGGGA GGAGCAAGTT CCTCATGACC ACGAACAGAG 
    CATTCTCGGA CTCATNATGG GAGATTCCAC ANATCCCTNT CTTGAACTCA 
    ACAGCATTCT CCAAACATNT CCCACCTTCC ACGACTCTGA CTACTCATCA 
    CCCGGTTTCG GAGTCGTCGA CACCGGCTTC GGTTTAGACC ACCACTCTGT 
    TCCGCCGTCA CATGTTTCCG GTCTTCTGAT CA

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR