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13-1045-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 867806 [Map]; Strand: c
      • AT1G03470.1 - [+] show detail - Kinase interacting (KIP1-like) family protein
        Distance: -73; Region: promoter
      • AT1G03470.2 - [+] show detail - Kinase interacting (KIP1-like) family protein
        Distance: -132; Region: promoter
    Flanking Genome Sequence: 13-1045-1 - 5-prime edge
    CNANNANGAA NCGCNNNTTC NNNNNNANAC GTNGAAAAAA NCAAGTTNAA 
    TAAAAANACN TTTTGTANGA NANACAAAAN CGGTTATACG ATAACGGTCG
    GTACGGGATT TTCCCATCCT ACTTTCATCC CAGGAAGAAT ACNAAACTCC
    NTAAAATTGC TCTCAAGGCG GAGAAGAAGA AGAAGAAGAA GAAGANGAAG
    ANNCGGCGCC GNNNATNNAT TGTNNNTCTN GGNTCNNCAC NCNCCGNGGN
    NGGNAATNNG GCGGAGCCNN NTGCTNTNCN GGGCNACNNG ACGATAATAN
    GTGATNNNAG NTNGCGNNNG ANAAANNCGN GNCCCNNCGC NNCANNNGGA
    AAACTGANTG GNNCGNGANC NNGANNNNNA GGAGGNCTAA NNGCCNNTTA
    ACTNNCGGAG NTNGGGGNAN GCCCACGGAG GNGNANNGGN AAAGGGAGNG
    NGANGGGGNG CGGGCGGGGN TNGNNNGNGC NANGNGNAAN NAGNGGNAGG
    ATAANGNNGA NNAANTANAG GCANCCNNNC ANNNCGNCNC NNTTCANAAN
    NCNGNNNTNC GANNNCNAAC NGGGCTTANN GNNANTNNAA CAANNCANTC
    NTNAANGTTA GTAGNTTNNT NAANAGATCN NANNANAAAA NANNNANCTC
    NTANGNNGCN NGCAACACAN NNNNAACAAT TNTAANNAAG ANTNCTGCNT
    GAAANACAAC NNGANCNANN NCNGCNCCCC NTATCNACCC GATCNNNNNN
    GGCNNAGNNG AANNNNGGCA GTGNGNAANN NNNAGNANGN GGAGAGNCGA
    NAAGGNTNNG NACGNANGAG GNNNGNGACG NGNGNNCGAN NNGGNGAACN
    CNNCNANCCG GNTCNNAGCA ATANAAANAN AAGCGAGGTG TATGGGGANA
    NNNNACACCN GCNNGGNTNA GTATANTATA NANACNANCN GNCANANATG
    NCGTNGNGGN GCNCCGNAAN CANNATCGCN NNAANNNNNT GGGTGNCANN
    NCNGNAGTAT NNAGNCN
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6496032 [Map]; Strand: w
      • AT3G18840.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -166; Region: promoter
    Flanking Genome Sequence: 13-1045-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    TGTTTTCCTT GACGCAAATT CAGCTAGGGT TTTATGTGGC TTCAAATTTG
    TAACCACCAG AAGCAGAGGA GACTTGCTTC TTAAGCT

AT1G03470.1

Model type
Protein coding
Short Description
Kinase interacting (KIP1-like) family protein
Computational Description
Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G47920.1); Has 687 Blast hits to 664 proteins in 124 species: Archae - 6; Bacteria - 10; Metazoa - 109; Fungi - 52; Plants - 347; Viruses - 3; Other Eukaryotes - 160 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G03470.2

Model type
Protein coding
Short Description
Kinase interacting (KIP1-like) family protein
Computational Description
Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G47920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G18840.2

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 42936 Blast hits to 13106 proteins in 190 species: Archae - 0; Bacteria - 3; Metazoa - 51; Fungi - 30; Plants - 42456; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink).
Link
InterPro Scan - TAIR